SHC Data For Bacterial & Yeast Isolates
2014
Streptococci & Enterococci
Percent Susceptible | No. Test- ed (a) | Penicillin or Ampicillin | Cef- uro- xime | Cef- tria- xone | Vanco- mycin | Erythro- mycin | Clinda- mycin | Mero- penem | Tri- metho- prim/ sulfa | Tetra- cycline (Doxy- cyc- line) | Genta- micin Syn- ergy with Pen/ Amp | Strepto- mycin Syn- ergy with Pen/ Amp | Moxi- flox- acin | Nitro- furan- toin (UTI only) | Quino- pristin/ dalfo- pristin | Cipro- flox- acin (UTI only) | Line- zolid | ||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
%S | %I | %R | |||||||||||||||||
Streptococci | |||||||||||||||||||
Grp. B (Strep. agalactiae) (b) | 147 | 100 | 0 | 0 | - | - | - | 52 | 56 | - | - | - | - | - | - | - | - | - | - |
Viridans (various species) | 171 | 85 | 15 | 0 | - | 99 | 100 | 60 | 75 | - | - | - | - | - | - | - | - | - | - |
Strep. pneumoniae (c) | 41 | 78d | - | 22 | 90 | 100d | 100 | 76 | 86 | 97 | 88 | - | - | - | 100 | - | - | - | - |
Enterococci | |||||||||||||||||||
Enterococcus (no species I.D.) (e) | 558 | 83 | 0 | 17 | - | - | 85 | - | - | - | - | 22 | - | - | - | 88 | - | 59 | 99 |
Enterococcus faecalis (e) | 100 | 100 | 0 | 0 | - | - | 96 | - | - | - | - | - | 68 | 86 | - | - | - | - | 99 |
Enterococcus faecium (e) | 126 | 13 | 0 | 87 | - | - | 31 | - | - | - | - | - | 98 | 35 | - | - | 100 | - | 94 |
Cost ($) | $ | $ | $ | $ | $ | $ | $ | $ | $$ | $ | $ | $ | $ | $ | $ | $$$$ | $ | $$$ |
- (a) First isolate from each patient was included.
- (b) Penicillin is the drug of choice for all beta hemolytic streptococci; penicillin resistance has not been documented. Clindamycin induction test performed on all beta hemolytic streptococci.
- (c) Penicillin-susceptible isolates are also susceptible to all other β-lactam agents. β-lactamase inhibitor combination drugs do not add additional efficacy to penicillin alone.
- (d) Based on meningitis interpretive criteria (more conservative). Nonmeningitis interpretation is 100% for penicillin. Infectious diseases consultation is recommended for meningitis in penicillin-allergic patients or those with resistant ceftriaxone or cefotaxime results.
- (e) If susceptible, ampicillin is the drug of choice when enterococci must be treated. Ampicillin susceptibility predicts piperacillin susceptibility. Nitrofurantoin or ampicillin is recommended for uncomplicated UTI. Serious infections (septicemia, endocarditis) require both a β-lactam agent and an aminoglycoside. Use vancomycin+aminoglycoside only if strain is ampicillin-resistant or patient is penicillin allergic. High level resistance to gentamicin also indicates lack of synergy for tobramycin, amikacin and kanamycin.
Candida
No.Tested | Amphotericin B (a) | Caspofungin | Fluconazole | Itraconazole | Voriconazole | |
---|---|---|---|---|---|---|
Candida albicans | 104 | 100 | 100 | 96 | 96 | 96 |
Candida glabrata | 60 | 100 | 92 | 95 | 87 | - |
Candida parapsilosis | 22(b) | 100 | 100 | 100 | 100 | 100 |
C. tropicalis | 8(b) | 100 | 88 | 88 | 100 | 100 |
Other Candida spp. | 24(b) | 100 | 79 | (c) | 100 | 96 |
Costs ($) | $$$$ | $$$$ | $ | $ | $$$$ |
- (a) Based on suggested resistant breakpoint MIC ≥ 2 µg/ml.
- (b) Data from < 30 isolates may be statistically unreliable.
- (c) Species other than C. krusei are 100% susceptible; C. krusei is intrinsically resistant to fluconazole.
Gram Negative Rods (a)
PENICILLINS | CEPHEMS | LACTAMS | AMINOGLYC's | OTHERS | Urine Only | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Percent Susceptible | No. Test- ed (a) | Ampi- cillin | Pipera- cillin | Amp/ Sul- bac- tam | Pip/ Tazo- bac- tam | Cefa- zolin [Urine Only] | Ceftri- axone | Cefe- pime | Aztreo- nam (b) | Imi- penem | Mero- penem | Genta- micin | Tobra- mycin | Amik- acin | Cipro- flox- acin | Levo- flox- acin | Tri- meth/ Sulfa- meth- ox | Nitro- furan- toin |
Achro- mobacter xylosoxidans | 34 | - | - | - | 85 | - | - | 21 | 0 | 91 | 79 | 12 | 6 | 9 | 9 | 47 | 85 | - |
Acinetobacter baumannii | 16(c) | - | - | 56 | - | - | - | 50 | - | - | 63 | 75 | 75 | 75 | 50 | 56 | 56 | - |
Burkholderia cepacia (d) | 10(c) | Ceftazidime 60% | - | Minocycline 70 | - | 60 | - | - | - | - | - | 50 | - | |||||
Citrobacter freundii complex | 61 | 0 | - | 0 | 90 | 0 | 78 | 97 | 84 | 96 | 100 | 93 | 92 | 100 | 88 | 90 | 77 | 81 |
Citrobacter koseri | 54 | 0 | - | 0 | 98 | 95 | 98 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 37 |
Enterobacter aerogenes | 70 | 0 | - | 0 | 88 | 0 | 84 | 100 | 82 | 100 | 100 | 100 | 100 | 100 | 96 | 97 | 100 | 9 |
Enterobacter cloacae complex | 164 | 0 | - | 0 | 85 | 0 | 73 | 100 | 78 | 100 | 100 | 99 | 97 | 100 | 97 | 98 | 93 | 24 |
Escherichia coli | 1780 | 51 | - | 41 | 95 | 83 | 90 | 96 | 82 | 100 | 100 | 90 | 89 | 100 | 78 | 78 | 71 | 93 |
Klebsiella oxytoca | 92 | 0 | - | 50 | 88 | 35 | 87 | 98 | 84 | 100 | 100 | 96 | 96 | 100 | 98 | 98 | 92 | 70 |
Klebsiella pneumoniae | 427 | 0 | - | 72 | 93 | 87 | 92 | 95 | 89 | 99 | 99 | 94 | 92 | 99 | 91 | 91 | 83 | 18 |
Morganella morganii | 32 | 0 | - | 13 | 100 | 0 | 97 | 100 | 100 | - | 100 | 83 | 93 | 100 | 86 | 90 | 58 | 0 |
Proteus mirabilis | 151 | 80 | - | 96 | 98 | 79 | 96 | 98 | 96 | - | 100 | 90 | 92 | 99 | 90 | 90 | 79 | 0 |
Proteus vulgaris | 13(c,e) | 0 | - | - | 100 | 0 | - | 100 | - | - | 100 | 100 | 100 | 100 | 100 | 100 | 93 | 0 |
Pseudomonas aeruginosa | 422 | - | - | - | 88 | - | - | 86 | 77 | 81 | 87 | 87 | 95 | 90 | 81 | 81 | - | - |
Ps. aeruginosa CF mucoid (d) | 153 | - | 84 | Ticarcillin 67% | - | 84 | 78 | 76 | 79 | - | 91 | - | 68 | - | - | - | ||
Ps. aeruginosa CF non-mucoid (d) | 101 | - | 70 | Ticarcillin 48% | - | 74 | 67 | 73 | 75 | - | 71 | - | 54 | - | - | - | ||
Salmonella spp. | 15(c) | 93 | - | - | - | Ceftriaxone 100% | - | - | - | - | - | - | - | 80 | - | 100 | - | |
Serratia marcescens | 88 | 0 | - | 0 | 100 | 0 | 98 | 100 | 99 | 100 | 100 | 100 | 92 | 100 | 93 | 97 | 99 | 0 |
Steno- trophomonas maltophilia | 110 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 83 | 97 | - |
Cost | $$ | $$ | $ | $$ | $ | $ | $ | $$$ | $$$ | $$ | $ | $ | $ | $ | $ | $ | $ |
- (a) First isolate from each patient was included.
- (b) Unlike aztreonam, aminoglycosides have synergistic activity with β-lactams (ex: piperacillin, ampicillin) against aerobic gram negative rods and enterococci. Aztreonam should only be used for treating documented infections due to susceptible organisms in patients with anaphylactic reactions to β-lactams. In patients with renal insufficiency, aminoglycosides can be administered safely when doses are adjusted for patient's renal function. For information on dosing, including single daily dosing, please contact a Clinical Pharmacist (beeper # available from unit secretary).
- (c) Data from isolate totals <30 may be statistically unreliable.
- (d) Cystic fibrosis patient isolates tested by disk diffusion.
- (e) Includes isolates from 2013.
Staphylococci
Percent Susceptible | No. Tested | Peni- cillin | Naf- cillin, Oxa- cillin (b, c) | 1st Gener- ation Cephems (c) | Vanco- mycin | Erythro- mycin | Clinda- mycin (d) | Genta- micin | Trimeth/ Sulfa | Moxi- floxacin | Tetra- cycline (Doxy) | Line- zolid |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Staphylococcus aureus, ALL (b) | 1185 | (a) | 76 | 76 | 100 | 58 | 72 | 97 | 99 | 73 | 93 | 100 |
MRSA (ONLY) (c) | 289 | 0 | 0 | 0 | 100 | 13 | 44 | 95 | 98 | 21 | 93 | 100 |
MSSA (ONLY) | 901 | (a) | 100 | 100 | 100 | 72 | 81 | 97 | 99 | 89 | 93 | 100 |
Staph. lugdunensis | 91 | (a) | 97 | 97 | 100 | 88 | 89 | 99 | 99 | 99 | - | 100 |
Staph. coagulase negative (other) | 262 | (a) | 39 | 39 | 100 | 36 | 61 | 79 | 60 | 54 | - | 100 |
Cost ($) | $ | $$ | $ | $ | $ | $ | $ | $ | $ | $ | $$$ |
- (a) Penicillin sensitivity confirmed by PCR per request. Penicillin-resistant staphylococci should be considered resistant to all penicillinase-sensitive penicillins, including ampicillin, amoxicillin, mezlocillin, piperacillin and ticarcillin.
- (b) For empiric therapy where S. aureus is a potential pathogen, nafcillin and first generation cephalosporins are recommended drugs of choice for infections other than serious or systemic, for which vancomycin should be used until the susceptibility results are available. Vancomycin MIC 2 mg/ml, currenlty interpreted sensitive, is associated with increased treatment failure.
- (c) Oxacillin resistant staphylococci (MRSA & MRSE) should be considered resistant to all penicillins, cephalosporins (except anti-MRSA cephalosporins), imipenem and beta-lactams including combinations with clavulanic acid, sulbactam and tazobactam. Oxacillin susceptibility predicts susceptibility to all other beta-lactams.
- (d) Clindamycin induction test performed on all staphylococcal isolates.
Anaerobes (Selected Species)
Percent Susceptible by Etest (a) | No. Tested | Penicillin | Amp/sulbactam | Pip/tazobactam | Meropenem | Clindamycin | Metronidazole |
---|---|---|---|---|---|---|---|
Bacteroides fragilis | 39 | 0 | 95 | 97 | 97 | 72 | 97 |
Bacteroides sp. NOT fragilis | 32 | 0 | 74 | 83 | 100 | 19 | 97 |
Gram negative rods (other) (b) | 31 | 87 | 100 | 100 | 100 | 90 | 100 |
Clostridium perfringens | 14 | 100 | 100 | 100 | - | 58 | 93 |
Clostridium sp. NOT perfringens | 32 | 63 | 100 | 100 | - | 57 | 93 |
Gram positive rods (other) (c) | 24 | 96 | 100 | 100 | 100 | 74 | 18 |
Gram positive cocci | 18 | 100 | 100 | 100 | - | 83(d) | 100 |
Cost ($) | $ | $ | $$ | $$ | $$ | $ |
- (a) Not all isolates tested with every drug
- (b) Include Fusobacterium, Prevotella, Porphyromonas, & other.
- (c) Non-sporeforming rods include Actinomyces, Bifidobacterium, Lactobacillus, Propionebacterium, and others.
- (d) Notify Micro Lab to perform antibiotic susceptibility testing if clindamycin is being considered for a Peptostreptococcus.
Campylobacter sp.
Drug (mcg/mL) | Percent Resistant |
---|---|
Ciprofloxacin | 30% R |
Doxycycline | 58% R |
Erythromycin | 0% R |
M. tuberculosis
Drug (mcg/mL) | Percent Resistant |
---|---|
Isoniazid (0.1) | 6% R |
Rifampin (2) | 0% R |
Ethambutol (25) | 0% R |
Pyrazinamide | 12% R |
Interpretation of susceptibility results
Results are reported as minimum inhibitory concentrations (MICs), the minimum amount of drug needed to inhibit growth in vitro. Interpretive criteria are based on achievable serum levels. For certain antibiotics, the amount excreted into the urine via the kidneys is above the MIC, and the agent is effective clinically in this site even though reported as "resistant". Intermediate results (I), especially for beta-lactam agents, indicate that doses higher than standard recommendations may be effective. In other cases, "I" results indicate that the organism may be susceptible or resistant but the in vitro tests are not sensitive enough to determine specifically. For this antibiogram, Intermediate results are NOT included within the "%S" category.
Situations for which the use of vancomycin is appropriate and acceptable
- For treatment of serious infections due to β-lactam-resistant gram- positive bacteria. Clinicians should be aware that vancomycin is usually less active and less rapidly bactericidal than β-lactam agents for organisms that are susceptible to the β-lactams. Clinicians should also be aware that vancomycin sensitive MIC 2mcg/ml is associated with increased treatment failures.
- For treatment of infections due to gram-positive organisms in patients with serious allergy to β-lactam- antibiotics.
- Prophylaxis, (infused 60-120 min before the first incision), in penicillin- allergic patients, as recommended by the Amer. Heart Assoc., for endocarditis following certain procedures in patients at high risk for endocarditis. Cephalosporins are still recommended for non-allergic patients.
- Prophylaxis for major surgical procedures involving implantation of prosthetic materials or devices, e.g., cardiac and vascular procedures and total hip replacements, at institutions with a high rate of infections due to MRSA or MRCoNS. Currently MRSA and MRCoNS rates are 24% and 61% at SHC, respectively. A single dose administered 60-120 min before surgery is sufficient unless the procedure lasts more than 6 hours, in which case the dose should be repeated. Prophylaxis should be dc'd after 2 doses maximum.
Haemophilus influenzae
For infections with β-lactamase- producing H. influenzae: cefuroxime, cefotaxime, trimethoprim/ sulfamethoxazole, amoxicillin/clavulanate or azithromycin is recommended. Cefotaxime or ceftriaxone is drug of choice for CNS infections. At Stanford, 74% of H. influenzae are ampicillin susceptible.

Clinical Microbiology
- Niaz Banaei, MD, Director
- Nancy Watz, CLS, Reference Technologist, Antibiotic Testing
- Diane Getsinger, CLS Reference Technologist, AFB/Mycology
- Patricia Buchner, CLS, Reference Technologist, Anaerobes