Abstract
Sensing and responding to fluxes in oxygen tension is perhaps the single most important variable in physiology, and animal tissues have developed a number of essential mechanisms to cope with the stress of low physiological oxygen levels, or hypoxia. Among these coping mechanisms is the response mediated by the hypoxia-inducible transcription factor, or HIF-1. HIF-1 is an essential component in changing the transcriptional repertoire of tissues as oxygen levels drop, and could prove to be a very important target for drug development, as treatments evolve for diseases, such as cancer, heart disease and stroke, in which hypoxia is a central aspect.
Key points
The adaptation of mammalian cells to low oxygen conditions is mediated in large part by the transcriptional induction of gene expression. Hypoxia-inducible factor (HIF) is crucial in the transcriptional response of cells to hypoxia.
The HIF transcription factor is composed of an oxygen-labile α-subunit and a constitutively expressed β-subunit. HIF belongs to a family of heleix–loop–helix PER/SIM/ARNT (HLH-PAS) transcription factors.
HIF-1α stability and activity are regulated by post-translational modifications, chaperone function and alternative splicing. These pathways have generated new targets for high-throughput screening strategies.
In transformed cells, HIF is regulated by oncogenic and tumour-suppressor gene mutations that cause it to become stabilized under aerobic conditions.
HIF-1 is involved in the inflammatory response. Inhibition of HIF-1 in myeloid cells can ameliorate and even prevent inflammation, indicating a new role for HIF modulators.
Development of HIF-inducing compounds provides a new approach to the regulation of erythropoietin and erythropoiesis in cancer patients, of angiogenesis in cardiovascular disease and of ischaemic injury in renal patients. Small molecules that affect prolyl hydroxylation or ubiquitylation provide a prime target for such regulation.
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Acknowledgements
We apologize for any references that have not been included that have contributed to our understanding of HIF. We would like to thank all the present and past members of our laboratories that contributed to the understanding of the role of hypoxia and HIF in normal tissue homeostasis and malignant progression. The work is supported by grants from the National Cancer Institute and the Auckland Cancer Research Society.
Author information
Affiliations
Department of Radiation Oncology, Stanford University School of Medicine, Stanford, California 94305-5468, USA.
- Amato Giaccia
Auckland Cancer Society Research Centre, University of Auckland, Private Bag 92019, Auckland, NZ.
- Bronwyn G. Siim
Division of Biological Sciences, University of California San Diego, 9500 Gilman Drive, MC-0366, La Jolla, California 92093-0366, USA.
- Randall S. Johnson
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Correspondence to Randall S. Johnson.
Glossary
- HYPOXIA-RESPONSE ELEMENT
(HRE). Initially identified as a 50-base-pair sequence in the 3′ flanking region of the erythropoietin gene. Although the core DNA binding element is 5′-ACGTG-3′, flanking sequences are also important in HRE functionality. Approximately 30 genes have been found to possess HREs.
- HLH–PAS DOMAIN
HLH is a helix–loop–helix motif that facilitates dimerization and DNA binding and is found in a substantial number of transcription factors. The PAS domain was named after PER, ARNT and SIM proteins that represent the first proteins in which this motif was identified. Functionally, the PAS domain facilitates protein–protein interactions between family members.
- GAL4 DNA-BINDING PROTEIN
A transcriptional activator identified in yeast, which, because it is specific for yeast, is used to make fusion proteins to study mammalian transcriptional regulators.
- OXYGEN-DEPENDENT DEGRADATION
(ODD). The ODD domain of HIF-1α binds to VHL under aerobic conditions. Deletion of this domain results in a HIF-1α protein that is oxygen insensitive and constitutively expressed under aerobic conditions.
- UBIQUITIN-MEDIATED DEGRADATION
The energy-requiring process of covalently linking ubiquitin to lysine residues of a substrate protein to signal protein degradation.
- VON HIPPEL-LINDAU
(VHL). A tumour-suppressor gene that possesses two substrate-binding domains, -α and -β. The α-domain binds to elongin C and CUL2, proteins that possess sequence similarity with proteins known to be involved in ubiquitin-mediated degradation. The β-domain of VHL binds HIF-1α.
- PROLYL HYDROXYLATION
A protein modification mediated by an evolutionarily conserved group of iron-dependent enzymes termed prolyl hydroxylases (PhDs). As they require oxygen for their activity, they have been implicated as the oxygen sensor that regulates HIF-1α stabilization. Loss of PhD activity in Caenorhabditis elegans and, more recently, in mammalian cells, has resulted in stabilization of HIF-1α under aerobic conditions.
- ASPARAGINE HYDROXYLATION
This modification of HIF-1α on asparagine 803 has been implicated in the control of HIF-1 transactivation potential. The gene identified that controls this modification is termed FIH.
- ACETYLATION
Acetylation has previously been implicated in promoting transcriptional activation. By contrast, acetylation of HIF-1α on lysine 532 by ARD1 has been shown to be involved in its degradation by the proteasome.
- DEHYDROXYLASE
An enzyme that can remove the hydroxyl group from proline 564 and promote HIF-1α stabilization.
- DEUBIQUITINASE
An enzyme that promotes the removal of ubiquitin from a substrate protein such as HIF-1α through the cleavage of isopeptide bonds. The enzymatic activity of a HIF-1α deubiquitinase should increase HIF-1α stabilization.
- HYPOXIA-SPECIFIC CYTOTOXIN
A molecule whose cytotoxic activity is inhibited under aerobic conditions and increased under hypoxic conditions.
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DOI
https://doi.org/10.1038/nrd1199
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