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Software

Workstations

Imaris (Bitplane) 3D Image Analysis Software

Imaris software specialises in handling 3D imaging data and also 3D time-series data. Imaris is optimised for handling large datasets and is an excellent tool for visualising, navigating and rendering images from this data.

For more information relating to Imaris, please see: http://www.bitplane.com/imaris/imaris

Workstation:

  • Processor: Intel® Xeon® Processor E5-2687W v2 (Eight Core HT, 3.4GHz Turbo, 25 MB)
  • Memory: 128GB (8x16GB) 1866 MHZ DDR3
  • Video Card: 4GB NVIDIA®  Quadro® K5000 

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LOCATION OF THE WORKSTATION: Shriram Center, Room B023


 

Volocity (PerkinElemer) 3D Image Analysis Software


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LOCATION OF THE WORKSTATION: Beckman Center, Room B050A


SVI Huygens 3D Image Analysis Software


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LOCATION OF THE WORKSTATION: Beckman Center, Room B050


SoftWoRx and Monet (OMX/Delta Vision)

  • Deconvolution
  • Structured Illumination Microscopy (SIM)
  • Localization super-res microscopy analysis (STORM)

RESERVE THIS WORKSTATION

LOCATION OF THE WORKSTATION: Beckman Center, Room B050A


Also Available:


MATLAB

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LOCATION OF THE WORKSTATION: Shriram Center, Room B023


ZENPRO

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LOCATION OF THE WORKSTATION: Shriram Center, Room B023


PHOTOSHOP

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LOCATION OF THE WORKSTATION: Beckman Center, Room B050A


FIJI

Download ImageJ and install it.

For use in your own lab, we recommend the use of Fiji, a free software for microscope images. Fiji is just ImageJ pre-packaged with Bio-Formats and other plugins. It also checks for updates automatically.