SGD’s Variant Viewer displays similarity scores and sequence variants for open reading frames (ORFs) within a reference panel of 12 widely-used S. cerevisiae genomes. All scores and variants are pr...
The GO Term Finder searches for significant shared GO terms, or parents of those GO terms, used to describe the genes in your list to help you discover what the genes may have in common.
The Gene Ontology (GO) is an integral part of modern biology. It provides a common language that unifies the description of gene products from all organisms, structured in a way that allows very de...
The Gene Ontology (GO) is an integral part of modern biology. It provides a common language that unifies the description of gene products from all organisms, structured in a way that allows very de...
The Sequence Page provides sequence and genome annotation information for the reference strain S288C, and several Alternative reference strains, as well as sequence download options for several oth...
To avoid gene naming conflicts, SGD accepts reservations for gene names that will be published soon. These names are unique identifiers for genes that are under active study and are intended for pu...
Saccharomyces cerevisiae and humans diverged about a billion years ago, but there’s still enough functional conservation between some pairs of yeast and human genes that they can be substituted for...
SGD's Protein pages provide details about yeast proteins, including nomenclature, biological roles, primary protein sequence, domains and motifs, post-translaional modifications, physicochemical pr...
SGD's Genome Snapshot summarizes the annotation status of the Saccharomyces cerevisiae genome. It gives you graphical overviews of the sequence features on each chromosome; the functions, processes...
The Literature page for a gene lists all published articles that are relevant to that gene. The articles are categorized by several topics, and an interactive graphic displays the relationships bet...
The Expression page presents detailed information about the expression of a particular gene product, along with references for each observation. It is accessible from the Expression section of the ...
The Interaction Network on SGD's Interaction pages is a visual representation of genetic interactions for a particular gene and the protein-protein interactions for its gene product. This video exp...
The Interactions page presents detailed information about genetic and physical interactions for a particular gene and gene product, along with references for each observation. In this video we will...
The Phenotype page presents detailed information about single mutant phenotypes for a particular gene, along with references for each observation. This page is accessible from the 'Phenotype' tab o...
The ability to use custom lists of objects, such as genes, is one feature that makes YeastMine so powerful and versatile. You can create a gene list using one query and feed it into another query f...
YeastMine allows you to do a lot of different things with lists. You can combine them, find their intersection, or find the differences between them. This provides a powerful way to build complex q...
One very powerful feature of YeastMine is that it allows you to make and save lists of your genes of interest. But once you have your list, what's next? This brief video illustrates how to run a te...
More on editing YeastMine templates, focusing on adding and changing constraints in existing templates. Includes instructions on limiting a query to a specified gene list.
This video illustrates how to add selected objects, such as genes, from the results of a query or from a Saved List to another Saved List in YeastMine.
List operations (union, intersect, and subtract) allow you to combine results from previous YeastMine queries and thus provide a powerful way to build complex queries.
One very powerful feature of YeastMine is that it allows you to make and save lists of your genes of interest. But once you have your list, what's next? This brief video illustrates how to run a te...
More on editing YeastMine templates, focusing on adding and changing constraints in existing templates. Includes instructions on limiting a query to a specified gene list.
An overview of YeastMine's major features. For more detailed information on any one of these features, please see separate tutorials offered on these topics (click on "Video Tour," located in the Y...
Did you know that after you run a query in YeastMine, you can save the results as a list? This lets you take the list and feed it into a different query to analyze it further. For example, you coul...
Creating lists is easy in YeastMine. Once you create a custom list (for example, genes that have come up in your genomic screen), you will immediately be presented with information about the genes ...
OMIM data has been loaded into SGD's YeastMine. Search for the human homolog(s) of your favorite yeast gene, or vice versa. View any associated OMIM diseases for the human homologs. Additionally, s...
OMIM data has been loaded into SGD's YeastMine. Search for the human homolog(s) of your favorite yeast gene, or vice versa. View any associated OMIM diseases for the human homologs. Additionally...
Did you know you can find and contribute teaching and other educational resources to SGD? We have updated our Educational Resources page, found on the SGD Community Wiki. Watch this video to see ...
If you're not already using YeastMine to answer all your questions about the Saccharomyces cerevisiae genome and the gene products it encodes...you should be!