Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Woodling, Nathaniel Shattuck (2006 - 2012) |
Andreasson |
Shi J, Johansson J, Woodling NS, Wang Q, Montine TJ, Andreasson K (2010) The prostaglandin E2 E-prostanoid 4 receptor exerts anti-inflammatory effects in brain innate immunity. J Immunol 184:7207-18 PMC3103215 pubmed |
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Grabrucker AM, Schmeisser MJ, Udvardi PT, Arons M, Schoen M, Woodling NS, Andreasson KI, Hof PR, Buxbaum JD, Garner CC, Boeckers TM (2011) Amyloid beta protein-induced zinc sequestration leads to synaptic loss via dysregulation of the ProSAP2/Shank3 scaffold. Mol Neurodegener 6:65 PMC3189132 pubmed |
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Liang X, Lin L, Woodling NS, Wang Q, Anacker C, Pan T, Merchant M, Andreasson K (2011) Signaling via the prostaglandin E₂ receptor EP4 exerts neuronal and vascular protection in a mouse model of cerebral ischemia. J Clin Invest 121:4362-71 PMC3204834 pubmed |
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Grant JL, Ghosn EE, Axtell RC, Herges K, Kuipers HF, Woodling NS, Andreasson K, Herzenberg LA, Herzenberg LA, Steinman L (2012) Reversal of paralysis and reduced inflammation from peripheral administration of β-amyloid in TH1 and TH17 versions of experimental autoimmune encephalomyelitis. Sci Transl Med 4:145ra105 PMC3677069 pubmed |
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Shi J, Wang Q, Johansson JU, Liang X, Woodling NS, Priyam P, Loui TM, Merchant M, Breyer RM, Montine TJ, Andreasson K (2012) Inflammatory prostaglandin E(2) signaling in a mouse model of Alzheimer disease. Ann Neurol 72:788-98 PMC3509238 pubmed |
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Johansson JU, Pradhan S, Lokteva LA, Woodling NS, Ko N, Brown HD, Wang Q, Loh C, Cekanaviciute E, Buckwalter M, Manning-Bog AB, Andreasson KI (2013) Suppression of inflammation with conditional deletion of the prostaglandin E2 EP2 receptor in macrophages and brain microglia. J Neurosci 33:16016-32 PMC3787507 pubmed |
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Woodling NS, Wang Q, Priyam PG, Larkin P, Shi J, Johansson JU, Zagol-Ikapitte I, Boutaud O, Andreasson KI (2014) Suppression of Alzheimer-associated inflammation by microglial prostaglandin-E2 EP4 receptor signaling. J Neurosci 34:5882-94 PMC3996215 pubmed |
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Johansson JU, Woodling NS, Wang Q, Panchal M, Liang X, Trueba-Saiz A, Brown HD, Mhatre SD, Loui T, Andreasson KI (2015) Prostaglandin signaling suppresses beneficial microglial function in Alzheimer's disease models. J Clin Invest 125:350-64 pubmed |
Pradhan, Suraj Sunil (2008 - 2014) |
Andreasson |
Pradhan S, Andreasson K (2013) Commentary: Progressive inflammation as a contributing factor to early development of Parkinson's disease. Exp Neurol 241:148-55 pubmed |
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Johansson JU, Pradhan S, Lokteva LA, Woodling NS, Ko N, Brown HD, Wang Q, Loh C, Cekanaviciute E, Buckwalter M, Manning-Bog AB, Andreasson KI (2013) Suppression of inflammation with conditional deletion of the prostaglandin E2 EP2 receptor in macrophages and brain microglia. J Neurosci 33:16016-32 PMC3787507 pubmed |
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Mentor: Stephen Baccus |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Kastner, David Barak (2007 - 2011) |
Baccus |
Kastner DB, Baccus SA (2011) Coordinated dynamic encoding in the retina using opposing forms of plasticity. Nat Neurosci 14:1317-22 PMC3359137 pubmed |
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Kastner DB, Baccus SA (2013) Spatial segregation of adaptation and predictive sensitization in retinal ganglion cells. Neuron 79:541-54 PMC4046856 pubmed |
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Kastner DB, Baccus SA (2014) Insights from the retina into the diverse and general computations of adaptation, detection, and prediction. Curr Opin Neurobiol 25:63-9 pubmed |
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Kastner DB, Baccus SA, Sharpee TO (2015) Critical and maximally informative encoding between neural populations in the retina. Proc Natl Acad Sci U S A : pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Foo, Lynette Caizhen (2006 - 2011) |
Barres |
Cahoy JD, Emery B, Kaushal A, Foo LC, Zamanian JL, Christopherson KS, Xing Y, Lubischer JL, Krieg PA, Krupenko SA, Thompson WJ, Barres BA (2008) A transcriptome database for astrocytes, neurons, and oligodendrocytes: a new resource for understanding brain development and function. J Neurosci 28:264-78 PMC: N/A pubmed |
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Dugas JC, Cuellar TL, Scholze A, Ason B, Ibrahim A, Emery B, Zamanian JL, Foo LC, McManus MT, Barres BA (2010) Dicer1 and miR-219 Are required for normal oligodendrocyte differentiation and myelination. Neuron 65:597-611 PMC2843397 pubmed |
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Foo LC, Allen NJ, Bushong EA, Ventura PB, Chung WS, Zhou L, Cahoy JD, Daneman R, Zong H, Ellisman MH, Barres BA (2011) Development of a method for the purification and culture of rodent astrocytes. Neuron 71:799-811 PMC3172573 pubmed |
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Zamanian JL, Xu L, Foo LC, Nouri N, Zhou L, Giffard RG, Barres BA (2012) Genomic analysis of reactive astrogliosis. J Neurosci 32:6391-410 PMC3480225 pubmed |
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Tien AC, Tsai HH, Molofsky AV, McMahon M, Foo LC, Kaul A, Dougherty JD, Heintz N, Gutmann DH, Barres BA, Rowitch DH (2012) Regulated temporal-spatial astrocyte precursor cell proliferation involves BRAF signalling in mammalian spinal cord. Development 139:2477-87 PMC3383225 pubmed |
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Allen NJ, Bennett ML, Foo LC, Wang GX, Chakraborty C, Smith SJ, Barres BA (2012) Astrocyte glypicans 4 and 6 promote formation of excitatory synapses via GluA1 AMPA receptors. Nature 486:410-4 PMC3383085 pubmed |
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Chung WS, Clarke LE, Wang GX, Stafford BK, Sher A, Chakraborty C, Joung J, Foo LC, Thompson A, Chen C, Smith SJ, Barres BA (2013) Astrocytes mediate synapse elimination through MEGF10 and MERTK pathways. Nature 504:394-400 PMC3969024 pubmed |
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Scholze AR, Foo LC, Mulinyawe S, Barres BA (2014) BMP Signaling in Astrocytes Downregulates EGFR to Modulate Survival and Maturation. PLoS One 9:e110668 PMC4201562 pubmed |
Wang, Tzu-Chieh (2008 - 2014) |
Barres |
Zhai Q, Wang J, Kim A, Liu Q, Watts R, Hoopfer E, Mitchison T, Luo L, He Z (2003) Involvement of the ubiquitin-proteasome system in the early stages of wallerian degeneration. Neuron 39:217-25 PMID:12873380 pubmed |
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Goldberg JL, Vargas ME, Wang JT, Mandemakers W, Oster SF, Sretavan DW, Barres BA (2004) An oligodendrocyte lineage-specific semaphorin, Sema5A, inhibits axon growth by retinal ganglion cells. J Neurosci 24:4989-99 PMID:15163691 pubmed |
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Wang JT, Kunzevitzky NJ, Dugas JC, Cameron M, Barres BA, Goldberg JL (2007) Disease gene candidates revealed by expression profiling of retinal ganglion cell development. J Neurosci 27:8593-603 PMC2885852 pubmed |
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Wang JT, Barres BA (2012) Axon Degeneration: Where the Wld(s) Things Are. Curr Biol 22:R221-3 N/A: Review paper and no NIH funding pubmed |
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Wang JT, Medress ZA, Barres BA (2012) Axon degeneration: Molecular mechanisms of a self-destruction pathway. J Cell Biol 196:7-18 PMC3255986 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Ramunas, John Anthony (2006 - 2014) |
Blau |
Shkolnikov V, Ramunas J, Santiago J (2010) A self-priming, roller-free, miniature, peristaltic pump operable with a single, reciprocating actuator Sensors & Actuators: A. Physical 160(1-2):141-146 NIHMSID 463242 |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Sridharan, Devarajan (2004 - 2010) |
Boahen and Knudsen |
Sridharan D, Levitin DJ, Chafe CH, Berger J, Menon V (2007) Neural dynamics of event segmentation in music: converging evidence for dissociable ventral and dorsal networks. Neuron 55:521-32pubmed |
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Sridharan D, Percival B, Arthur J, Boahen K (2008) An in-silico model of dynamic routing through neuronal coherence. Advances in Neural Information Processing Systems 20 1401-1408 |
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Sridharan D, Levitin DJ, Menon V (2008) A critical role for the right fronto-insular cortex in switching between central-executive and default-mode networks. Proc Natl Acad Sci U S A 105:12569-74 PMC2527952 pubmed |
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Sridharan D, Boahen K, Knudsen EI (2011) Space coding by gamma oscillations in the barn owl optic tectum. J Neurophysiol 105:2005-17 PMC3094170 pubmed |
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Goddard CA, Sridharan D, Huguenard JR, Knudsen EI (2012) Gamma oscillations are generated locally in an attention-related midbrain network. Neuron 73:567-80 PMC3291715 pubmed |
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Sridharan D, Ramamurthy DL, Knudsen EI (2013) Spatial probability dynamically modulates visual target detection in chickens. PLoS One 8:e64136 PMC3667102 pubmed |
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Schwarz JS, Sridharan D, Knudsen EI (2013) Magnetic tracking of eye position in freely behaving chickens. Front Syst Neurosci 7:91 PMC3833096 pubmed |
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Sridharan D, Ramamurthy DL, Schwarz JS, Knudsen EI (2014) Visuospatial selective attention in chickens. Proc Natl Acad Sci U S A 111:E2056-65 PMC4024881 pubmed |
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Sridharan D, Schwarz JS, Knudsen EI (2014) Selective attention in birds. Curr Biol 24:R510-3 pubmed |
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Sridharan D, Steinmetz NA, Moore T, Knudsen EI (2014) Distinguishing bias from sensitivity effects in multialternative detection tasks. J Vis 14: PMC4141865 pubmed |
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Sridharan D, Knudsen EI (2014) Gamma oscillations in the midbrain spatial attention network: linking circuits to function. Curr Opin Neurobiol 31C:189-198 pubmed |
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Sridharan D, Knudsen EI (2014) Selective disinhibition: A unified neural mechanism for predictive and post hoc attentional selection. Vision Res : pubmed |
Steinmetz, Nicholas Adam (2007 - 2013) |
Boahen & Moore |
Steinmetz NA, Moore T (2010) Changes in the response rate and response variability of area V4 neurons during the preparation of saccadic eye movements. J Neurophysiol 103:1171-8 N/A: Publisher provided directly to PMC instead of a PMCID number pubmed |
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Noudoost B, Chang MH, Steinmetz NA, Moore T (2010) Top-down control of visual attention. Curr Opin Neurobiol 20:183-90 PMC2901796 pubmed |
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Steinmetz NA, Moore T (2012) Lumping and splitting the neural circuitry of visual attention. Neuron 73:410-2 N/A: Commentary article w/ no NIH or other funding pubmed |
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Zirnsak M, Steinmetz NA, Noudoost B, Xu KZ, Moore T (2014) Visual space is compressed in prefrontal cortex before eye movements. Nature 507:504-7 PMC4064801 pubmed |
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Steinmetz NA, Moore T (2014) Eye movement preparation modulates neuronal responses in area V4 when dissociated from attentional demands. Neuron 83:496-506 PMC4130345 pubmed |
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Sridharan D, Steinmetz NA, Moore T, Knudsen EI (2014) Distinguishing bias from sensitivity effects in multialternative detection tasks. J Vis 14: PMC4141865 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Rafalski, Victoria Antonina (2005 - 2011) |
Brunet |
Renault VM, Rafalski VA, Morgan AA, Salih DA, Brett JO, Webb AE, Villeda SA, Thekkat PU, Guillerey C, Denko NC, Palmer TD, Butte AJ, Brunet A (2009) FoxO3 regulates neural stem cell homeostasis. Cell Stem Cell 5:527-39 PMC2775802 pubmed |
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Rafalski VA, Brunet A (2011) Energy metabolism in adult neural stem cell fate. Prog Neurobiol 93:182-203 N/A: This was a review article that arose from a CIRM-supported project pubmed |
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Brett JO, Renault VM, Rafalski VA, Webb AE, Brunet A (2011) The microRNA cluster miR-106b~25 regulates adult neural stem/progenitor cell proliferation and neuronal differentiation. Aging (Albany NY) 3:108-24 PMC3082007 pubmed |
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Rafalski VA, Mancini E, Brunet A (2012) Energy metabolism and energy-sensing pathways in mammalian embryonic and adult stem cell fate. J Cell Sci 125:5597-608 PMC3575699 pubmed |
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Rafalski VA, Ho PP, Brett JO, Ucar D, Dugas JC, Pollina EA, Chow LM, Ibrahim A, Baker SJ, Barres BA, Steinman L, Brunet A (2013) Expansion of oligodendrocyte progenitor cells following SIRT1 inactivation in the adult brain. Nat Cell Biol 15:614-24 PMC4026158 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Toyoda, Izumi (2007 - 2014) |
Buckmaster |
Ingram EA, Toyoda I, Wen X, Buckmaster PS (2009) Prolonged infusion of inhibitors of calcineurin or L-type calcium channels does not block mossy fiber sprouting in a model of temporal lobe epilepsy. Epilepsia 50:56-64 PMC3007596 pubmed |
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Toyoda I, Bower MR, Leyva F, Buckmaster PS (2013) Early Activation of Ventral Hippocampus and Subiculum during Spontaneous Seizures in a Rat Model of Temporal Lobe Epilepsy. J Neurosci 33:11100-15 PMC3718374 pubmed |
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Buckmaster PS, Wen X, Toyoda I, Gulland FM, Van Bonn W (2014) Hippocampal neuropathology of domoic acid-induced epilepsy in California sea lions (Zalophus californianus). J Comp Neurol 522:1691-706 PMC4100486 pubmed |
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Fujita S, Toyoda I, Thamattoor AK, Buckmaster PS (2014) Preictal activity of subicular, CA1, and dentate gyrus principal neurons in the dorsal hippocampus before spontaneous seizures in a rat model of temporal lobe epilepsy. J Neurosci 34:16671-87 PMC4261094 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Cekanaviciute, Egle (2008 - 2013) |
Buckwalter |
Doyle KP, Cekanaviciute E, Mamer LE, Buckwalter MS (2010) TGFβ signaling in the brain increases with aging and signals to astrocytes and innate immune cells in the weeks after stroke. J Neuroinflammation 7:62 PMC2958905 pubmed |
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Han J, Pollak J, Yang T, Siddiqui MR, Doyle KP, Taravosh-Lahn K, Cekanaviciute E, Han A, Goodman JZ, Jones B, Jing D, Massa SM, Longo FM, Buckwalter MS (2012) Delayed administration of a small molecule tropomyosin-related kinase B ligand promotes recovery after hypoxic-ischemic stroke. Stroke 43:1918-24 PMC3383889 pubmed |
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Johansson JU, Pradhan S, Lokteva LA, Woodling NS, Ko N, Brown HD, Wang Q, Loh C, Cekanaviciute E, Buckwalter M, Manning-Bog AB, Andreasson KI (2013) Suppression of inflammation with conditional deletion of the prostaglandin E2 EP2 receptor in macrophages and brain microglia. J Neurosci 33:16016-32 PMC3787507 pubmed |
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Cekanaviciute E, Fathali N, Doyle KP, Williams AM, Han J, Buckwalter MS (2014) Astrocytic transforming growth factor-beta signaling reduces subacute neuroinflammation after stroke in mice. Glia 62:1227-40 PMC4061255 pubmed |
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Cekanaviciute E, Dietrich HK, Axtell RC, Williams AM, Egusquiza R, Wai KM, Koshy AA, Buckwalter MS (2014) Astrocytic TGF-β signaling limits inflammation and reduces neuronal damage during central nervous system Toxoplasma infection. J Immunol 193:139-49 PMC4075480 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Katsov, Alexander (2001 - 2008) |
Clandinin |
Katsov A, Clandinin TR (2006) Insect vision: remembering the shape of things. Curr Biol 16:R369-71 PMID:16713946 pubmed |
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Katsov AY, Clandinin TR (2008) Motion processing streams in Drosophila are behaviorally specialized. Neuron 59:322-35 PMC3391501 pubmed |
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Fitzgerald JE, Katsov AY, Clandinin TR, Schnitzer MJ (2011) Symmetries in stimulus statistics shape the form of visual motion estimators. Proc Natl Acad Sci U S A 108:12909-14 PMC3150910pubmed |
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Gao XJ, Potter CJ, Gohl DM, Silies M, Katsov AY, Clandinin TR, Luo L (2013) Specific kinematics and motor-related neurons for aversive chemotaxis in Drosophila. Curr Biol 23:1163-72 PMC3762259 pubmed |
Mast, Joshua (2001 - 2007) |
Clandinin |
Mast JD, Prakash S, Chen PL, Clandinin TR (2006) The mechanisms and molecules that connect photoreceptor axons to their targets in Drosophila. Semin Cell Dev Biol 17:42-9 PMID:16337412pubmed |
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Mast JD, Tomalty KM, Vogel H, Clandinin TR (2008) Reactive oxygen species act remotely to cause synapse loss in a Drosophila model of developmental mitochondrial encephalopathy. Development 135:2669-79 PMC2892278 pubmed |
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Gontang AC, Hwa JJ, Mast JD, Schwabe T, Clandinin TR (2011) The cytoskeletal regulator Genghis khan is required for columnar target specificity in the Drosophila visual system. Development 138:4899-909 PMC3201660 pubmed |
Chen, Pei-Ling (2003 - 2007) |
Clandinin |
Mast JD, Prakash S, Chen PL, Clandinin TR (2006) The mechanisms and molecules that connect photoreceptor axons to their targets in Drosophila. Semin Cell Dev Biol 17:42-9 PMID:16337412pubmed |
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Chen PL, Clandinin TR (2008) The cadherin Flamingo mediates level-dependent interactions that guide photoreceptor target choice in Drosophila. Neuron 58:26-33 PMC2494600 pubmed |
Prakash, Saurabh (2003 - 2008) |
Clandinin |
Prakash S, Caldwell JC, Eberl DF, Clandinin TR (2005) Drosophila N-cadherin mediates an attractive interaction between photoreceptor axons and their targets. Nat Neurosci 8:443-50 PMC2367251pubmed |
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Mast JD, Prakash S, Chen PL, Clandinin TR (2006) The mechanisms and molecules that connect photoreceptor axons to their targets in Drosophila. Semin Cell Dev Biol 17:42-9 PMID:16337412pubmed |
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Choe KM, Prakash S, Bright A, Clandinin TR (2006) Liprin-alpha is required for photoreceptor target selection in Drosophila. Proc Natl Acad Sci U S A 103:11601-6 PMC1544216 pubmed |
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Prakash S, McLendon HM, Dubreuil CI, Ghose A, Hwa J, Dennehy KA, Tomalty KM, Clark KL, Van Vactor D, Clandinin TR (2009) Complex interactions amongst N-cadherin, DLAR, and Liprin-alpha regulate Drosophila photoreceptor axon targeting. Dev Biol 336:10-9 PMC2783772 pubmed |
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Prakash S, Dumoulin SO, Fischbein N, Wandell BA, Liao YJ (2010) Congenital achiasma and see-saw nystagmus in VACTERL syndrome. J Neuroophthalmol 30:45-8 PMC3550004 pubmed |
Velez, Mariel Marques (2003 - 2009) |
Clandinin |
Velez MM, Clandinin TR (2008) Neural circuitry: seeing the parts that make the picture. Curr Biol 18:R378-80 N/A: accepted for publication before April 7, 2008 pubmed |
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Wernet MF, Velez MM, Clark DA, Baumann-Klausener F, Brown JR, Klovstad M, Labhart T, Clandinin TR (2012) Genetic dissection reveals two separate retinal substrates for polarization vision in Drosophila. Curr Biol 22:12-20 PMC3258365 pubmed |
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Velez MM, Wernet MF, Clark DA, Clandinin TR (2014) Walking Drosophila align with the e-vector of linearly polarized light through directed modulation of angular acceleration. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 200:603-14 pubmed |
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Velez MM, Gohl D, Clandinin TR, Wernet MF (2014) Differences in Neural Circuitry Guiding Behavioral Responses to Polarized light Presented to Either the Dorsal or Ventral Retina in Drosophila. J Neurogenet :1-13 pubmed |
Gontang, Allison (2004 - 2009) |
Clandinin |
Schuldiner O, Berdnik D, Levy JM, Wu JS, Luginbuhl D, Gontang AC, Luo L (2008) piggyBac-based mosaic screen identifies a postmitotic function for cohesin in regulating developmental axon pruning. Dev Cell 14:227-38 PMC2268086 pubmed |
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Gontang AC, Hwa JJ, Mast JD, Schwabe T, Clandinin TR (2011) The cytoskeletal regulator Genghis khan is required for columnar target specificity in the Drosophila visual system. Development 138:4899-909 PMC3201660 pubmed |
Hwa, Jennifer (2005 - 2011) |
Clandinin |
Prakash S, McLendon HM, Dubreuil CI, Ghose A, Hwa J, Dennehy KA, Tomalty KM, Clark KL, Van Vactor D, Clandinin TR (2009) Complex interactions amongst N-cadherin, DLAR, and Liprin-alpha regulate Drosophila photoreceptor axon targeting. Dev Biol 336:10-9 PMC2783772 pubmed |
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Hwa JS, Mun L, Kim HJ, Seo HG, Lee JH, Kwak JH, Lee DU, Chang KC (2011) Genipin Selectively Inhibits TNF-α-activated VCAM-1 But Not ICAM-1 Expression by Upregulation of PPAR-γ in Human Endothelial Cells. Korean J Physiol Pharmacol 15:157-62 PMC3154380 pubmed |
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Gontang AC, Hwa JJ, Mast JD, Schwabe T, Clandinin TR (2011) The cytoskeletal regulator Genghis khan is required for columnar target specificity in the Drosophila visual system. Development 138:4899-909 PMC3201660 pubmed |
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Hwa JJ, Clandinin TR (2012) Apical-basal polarity proteins are required cell-type specifically to direct photoreceptor morphogenesis. Curr Biol 22:2319-24 PMC3623937 pubmed |
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Gohl DM, Freifeld L, Silies M, Hwa JJ, Horowitz M, Clandinin TR (2013) Large-Scale Mapping of Transposable Element Insertion Sites Using Digital Encoding of Sample Identity. Genetics : PMC3948795 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Carter, Matthew Evan (2004 - 2010) |
de Lecea |
Carter ME, Brunet A (2007) FOXO transcription factors. Curr Biol 17:R113-4 pubmed |
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Carter ME, Schaich Borg J, de Lecea L (2009) The brain hypocretins and their receptors: mediators of allostatic arousal. Curr Opin Pharmacol 9:39-45 NIHMSID#468294 pubmed |
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Carter ME, Adamantidis A, Ohtsu H, Deisseroth K, de Lecea L (2009) Sleep homeostasis modulates hypocretin-mediated sleep-to-wake transitions. J Neurosci 29:10939-49 PMC3849591 pubmed |
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Carter ME, Yizhar O, Chikahisa S, Nguyen H, Adamantidis A, Nishino S, Deisseroth K, de Lecea L (2010) Tuning arousal with optogenetic modulation of locus coeruleus neurons. Nat Neurosci 13:1526-33 PMC3174240 pubmed |
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Carter ME, de Lecea L (2011) Optogenetic investigation of neural circuits in vivo. Trends Mol Med 17:197-206 PMC3148823 pubmed |
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Rolls A, Colas D, Adamantidis A, Carter M, Lanre-Amos T, Heller HC, de Lecea L (2011) Optogenetic disruption of sleep continuity impairs memory consolidation. Proc Natl Acad Sci U S A 108:13305-10 PMC3156195 pubmed |
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de Lecea L, Carter ME, Adamantidis A (2012) Shining Light on Wakefulness and Arousal. Biol Psychiatry : NIHMSID#365692 pubmed |
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Carter ME, Brill J, Bonnavion P, Huguenard JR, Huerta R, de Lecea L (2012) Mechanism for Hypocretin-mediated sleep-to-wake transitions. Proc Natl Acad Sci U S A 109:E2635-44 PMC3465396pubmed |
Schaich Borg, Jana (2006 - 2012) |
de Lecea & Newsome |
Carter ME, Schaich Borg J, de Lecea L (2009) The brain hypocretins and their receptors: mediators of allostatic arousal. Curr Opin Pharmacol 9:39-45 NIHMSID#468294 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Meltzer, Leslie (2003 - 2008) |
Deisseroth |
Meltzer LA, Yabaluri R, Deisseroth K (2005) A role for circuit homeostasis in adult neurogenesis. Trends Neurosci 28:653-60 PMID:16271403 pubmed |
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Airan RD, Meltzer LA, Roy M, Gong Y, Chen H, Deisseroth K (2007) High-speed imaging reveals neurophysiological links to behavior in an animal model of depression. Science 317:819-23 pubmed |
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Airan RD, Hu ES, Vijaykumar R, Roy M, Meltzer LA, Deisseroth K (2007) Integration of light-controlled neuronal firing and fast circuit imaging. Curr Opin Neurobiol 17:587-92 pubmed |
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Aravanis AM, Wang LP, Zhang F, Meltzer LA, Mogri MZ, Schneider MB, Deisseroth K (2007) An optical neural interface: in vivo control of rodent motor cortex with integrated fiberoptic and optogenetic technology. J Neural Eng 4:S143-56 pubmed |
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Li HH, Roy M, Kuscuoglu U, Spencer CM, Halm B, Harrison KC, Bayle JH, Splendore A, Ding F, Meltzer LA, Wright E, Paylor R, Deisseroth K, Francke U (2009) Induced chromosome deletions cause hypersociability and other features of Williams-Beuren syndrome in mice. EMBO Mol Med 1:50-65 PMC3378107 pubmed |
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Unrod M, Simmons VN, Sutton SK, Meltzer LR, Harrell PT, Meade CD, Craig BM, Lee JH, Brandon TH (2014) A randomized clinical trial of self-help intervention for smoking cessation: research design, interventions, and baseline data. Contemp Clin Trials 38:284-90 PMC4104245 pubmed |
Gradinaru, Viviana (2005 - 2010) |
Deisseroth |
Gradinaru V, Thompson KR, Zhang F, Mogri M, Kay K, Schneider MB, Deisseroth K (2007) Targeting and readout strategies for fast optical neural control in vitro and in vivo. J Neurosci 27:14231-8pubmed |
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Schneider MB, Gradinaru V, Zhang F, Deisseroth K (2008) Controlling neuronal activity. Am J Psychiatry 165:562 pubmed |
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Gradinaru V, Thompson KR, Deisseroth K (2008) eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications. Brain Cell Biol 36:129-39 PMC2588488 pubmed |
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Gradinaru V, Mogri M, Thompson KR, Henderson JM, Deisseroth K (2009) Optical deconstruction of parkinsonian neural circuitry. Science 324:354-9 pubmed |
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Zhang F, Gradinaru V, Adamantidis AR, Durand R, Airan RD, de Lecea L, Deisseroth K (2010) Optogenetic interrogation of neural circuits: technology for probing mammalian brain structures. Nat Protoc 5:439-56 pubmed |
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Gradinaru V, Zhang F, Ramakrishnan C, Mattis J, Prakash R, Diester I, Goshen I, Thompson KR, Deisseroth K (2010) Molecular and cellular approaches for diversifying and extending optogenetics. Cell 141:154-65 PMC4160532 pubmed |
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Lee JH, Durand R, Gradinaru V, Zhang F, Goshen I, Kim DS, Fenno LE, Ramakrishnan C, Deisseroth K (2010) Global and local fMRI signals driven by neurons defined optogenetically by type and wiring. Nature 465:788-92 PMC3177305 pubmed |
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Witten IB, Lin SC, Brodsky M, Prakash R, Diester I, Anikeeva P, Gradinaru V, Ramakrishnan C, Deisseroth K (2010) Cholinergic interneurons control local circuit activity and cocaine conditioning. Science 330:1677-81 PMC3142356 pubmed |
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Tye KM, Prakash R, Kim S-Y, Fenno LE, Grosenick L, Zarabi H, Thompson KR, Gradinaru V, Ramakrishnan C, Deisseroth K (2011) Amygdala circuitry mediating reversible and bidirectional control of anxiety. Nature 471:358-62 PMC3154022 pubmed |
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Berndt A, Schoenenberger P, Mattis J, Tye KM, Deisseroth K, Hegemann P, Oertner TG (2011) High-efficiency channelrhodopsins for fast neuronal stimulation at low light levels. Proc Natl Acad Sci U S A 108:7595-600 PMC3088623 pubmed |
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Goshen I, Brodsky M, Prakash R, Wallace J, Gradinaru V, Ramakrishnan C, Deisseroth K (2011) Dynamics of retrieval strategies for remote memories. Cell 147:678-89 pubmed |
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Domingos AI, Vaynshteyn J, Voss HU, Ren X, Gradinaru V, Zang F, Deisseroth K, de Araujo IE, Friedman J (2011) Leptin regulates the reward value of nutrient. Nat Neurosci 14:1562-8 PMC4238286 pubmed |
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Chung K, Wallace J, Kim SY, Kalyanasundaram S, Andalman AS, Davidson TJ, Mirzabekov JJ, Zalocusky KA, Mattis J, Denisin AK, Pak S, Bernstein H, Ramakrishnan C, Grosenick L, Gradinaru V, Deisseroth K (2013) Structural and molecular interrogation of intact biological systems. Nature 497:332-7 PMC4092167 pubmed |
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Sukhotinsky I, Chan AM, Ahmed OJ, Rao VR, Gradinaru V, Ramakrishnan C, Deisseroth K, Majewska AK, Cash SS (2013) Optogenetic delay of status epilepticus onset in an in vivo rodent epilepsy model. PLoS One 8:e62013 PMC3634849 pubmed |
Tsai, Hsing-Chen (2005 - 2010) |
Deisseroth |
Tsai HC, Zhang F, Adamantidis A, Stuber GD, Bonci A, de Lecea L, Deisseroth K (2009) Phasic firing in dopaminergic neurons is sufficient for behavioral conditioning. Science 324:1080-4 pubmed |
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Adamantidis AR, Tsai HC, Boutrel B, Zhang F, Stuber GD, Budygin EA, Touriño C, Bonci A, Deisseroth K, de Lecea L (2011) Optogenetic interrogation of dopaminergic modulation of the multiple phases of reward-seeking behavior. J Neurosci 31:10829-35 PMC3171183 pubmed |
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Stroh A, Tsai HC, Wang LP, Zhang F, Kressel J, Aravanis A, Santhanam N, Deisseroth K, Konnerth A, Schneider MB (2011) Tracking stem cell differentiation in the setting of automated optogenetic stimulation. Stem Cells 29:78-88 PMC4182948 pubmed |
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Tien AC, Tsai HH, Molofsky AV, McMahon M, Foo LC, Kaul A, Dougherty JD, Heintz N, Gutmann DH, Barres BA, Rowitch DH (2012) Regulated temporal-spatial astrocyte precursor cell proliferation involves BRAF signalling in mammalian spinal cord. Development 139:2477-87 PMC3383225 pubmed |
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Tye KM, Mirzabekov JJ, Warden MR, Ferenczi EA, Tsai HC, Finkelstein J, Kim SY, Adhikari A, Thompson KR, Andalman AS, Gunaydin LA, Witten IB, Deisseroth K (2013) Dopamine neurons modulate neural encoding and expression of depression-related behaviour. Nature 493:537-41 PMC4160519 pubmed |
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Chaudhury D, Walsh JJ, Friedman AK, Juarez B, Ku SM, Koo JW, Ferguson D, Tsai HC, Pomeranz L, Christoffel DJ, Nectow AR, Ekstrand M, Domingos A, Mazei-Robison MS, Mouzon E, Lobo MK, Neve RL, Friedman JM, Russo SJ, Deisseroth K, Nestler EJ, Han MH (2013) Rapid regulation of depression-related behaviours by control of midbrain dopamine neurons. Nature 493:532-6 PMC3554860 pubmed |
Gunaydin, Lisa Aila (2007 - 2012) |
Deisseroth |
Berndt A, Yizhar O, Gunaydin LA, Hegemann P, Deisseroth K (2009) Bi-stable neural state switches. Nat Neurosci 12:229-34 pubmed |
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Gunaydin LA, Yizhar O, Berndt A, Sohal VS, Deisseroth K, Hegemann P (2010) Ultrafast optogenetic control. Nat Neurosci 13:387-92 pubmed |
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Anikeeva P, Andalman AS, Witten I, Warden M, Goshen I, Grosenick L, Gunaydin LA, Frank LM, Deisseroth K (2012) Optetrode: a multichannel readout for optogenetic control in freely moving mice. Nat Neurosci 15:163-70 PMC4164695 pubmed |
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Mattis J, Tye KM, Ferenczi EA, Ramakrishnan C, O'Shea DJ, Prakash R, Gunaydin LA, Hyun M, Fenno LE, Gradinaru V, Yizhar O, Deisseroth K (2012) Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins. Nat Methods 9:159-72 PMC4165888 pubmed |
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Tye KM, Mirzabekov JJ, Warden MR, Ferenczi EA, Tsai HC, Finkelstein J, Kim SY, Adhikari A, Thompson KR, Andalman AS, Gunaydin LA, Witten IB, Deisseroth K (2013) Dopamine neurons modulate neural encoding and expression of depression-related behaviour. Nature 493:537-41 PMC4160519 pubmed |
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Gunaydin LA, Grosenick L, Finkelstein JC, Kauvar IV, Fenno LE, Adhikari A, Lammel S, Mirzabekov JJ, Airan RD, Zalocusky KA, Tye KM, Anikeeva P, Malenka RC, Deisseroth K (2014) Natural Neural Projection Dynamics Underlying Social Behavior Cell 157(7): 1535 - 1551 |
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Gunaydin LA, Grosenick L, Finkelstein JC, Kauvar IV, Fenno LE, Adhikari A, Lammel S, Mirzabekov JJ, Airan RD, Zalocusky KA, Tye KM, Anikeeva P, Malenka RC, Deisseroth K (2014) Natural neural projection dynamics underlying social behavior. Cell 157:1535-51 PMC4123133 pubmed |
Fenno, Lief Ericsson (2008 - 2013) |
Deisseroth |
Airan RD, Thompson KR, Fenno LE, Bernstein H, Deisseroth K (2009) Temporally precise in vivo control of intracellular signalling. Nature 458:1025-9 pubmed |
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Lee JH, Durand R, Gradinaru V, Zhang F, Goshen I, Kim DS, Fenno LE, Ramakrishnan C, Deisseroth K (2010) Global and local fMRI signals driven by neurons defined optogenetically by type and wiring. Nature 465:788-92 PMC3177305 pubmed |
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Paralikar, K.; Peng Cong; Yizhar, O.; Fenno, L.E.; Santa, W.; Nielsen, C.; Dinsmoor, D.; Hocken, B.; Munns, G.O.; Giftakis, J.; Deisseroth, K.; Denison, T. (2011) An Implantable Optical Stimulation Delivery System for Actuating an Excitable Biosubstrate IEEE Journal of Solid-State Circuits 46(1):321-332 |
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Yizhar O, Fenno L, Zhang F, Hegemann P, Deisseroth K (2011) Microbial opsins: a family of single-component tools for optical control of neural activity. Cold Spring Harb Protoc 2011:top102pubmed |
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Tye KM, Prakash R, Kim S-Y, Fenno LE, Grosenick L, Zarabi H, Thompson KR, Gradinaru V, Ramakrishnan C, Deisseroth K (2011) Amygdala circuitry mediating reversible and bidirectional control of anxiety. Nature 471:358-62 PMC3154022 pubmed |
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Fenno L, Yizhar O, Deisseroth K (2011) The development and application of optogenetics. Annu Rev Neurosci 34:389-412 pubmed |
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Yizhar O, Fenno LE, Davidson TJ, Mogri M, Deisseroth K (2011) Optogenetics in neural systems. Neuron 71:9-34 pubmed |
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Yizhar O, Fenno LE, Prigge M, Schneider F, Davidson TJ, O'Shea DJ, Sohal VS, Goshen I, Finkelstein J, Paz JT, Stehfest K, Fudim R, Ramakrishnan C, Huguenard JR, Hegemann P, Deisseroth K(2011) Neocortical excitation/inhibition balance in information processing and social dysfunction. Nature 477:171-8 PMC4155501 pubmed |
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Paz JT, Bryant AS, Peng K, Fenno L, Yizhar O, Frankel WN, Deisseroth K, Huguenard JR (2011) A new mode of corticothalamic transmission revealed in the Gria4(-/-) model of absence epilepsy. Nat Neurosci 14:1167-73 PMC3308017 pubmed |
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Byers B, Cord B, Nguyen HN, Schüle B, Fenno L, Lee PC, Deisseroth K, Langston JW, Pera RR, Palmer TD (2011) SNCA triplication Parkinson's patient's iPSC-derived DA neurons accumulate α-synuclein and are susceptible to oxidative stress. PLoS One 6:e26159 PMC3217921 pubmed |
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Zhang F, Vierock J, Yizhar O, Fenno LE, Tsunoda S, Kianianmomeni A, Prigge M, Berndt A, Cushman J, Polle J, Magnuson J, Hegemann P, Deisseroth K (2011) The microbial opsin family of optogenetic tools. Cell 147:1446-57 PMC4166436 pubmed |
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Mattis J, Tye KM, Ferenczi EA, Ramakrishnan C, O'Shea DJ, Prakash R, Gunaydin LA, Hyun M, Fenno LE, Gradinaru V, Yizhar O, Deisseroth K (2012) Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins. Nat Methods 9:159-72 PMC4165888 pubmed |
|
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Gunaydin LA, Grosenick L, Finkelstein JC, Kauvar IV, Fenno LE, Adhikari A, Lammel S, Mirzabekov JJ, Airan RD, Zalocusky KA, Tye KM, Anikeeva P, Malenka RC, Deisseroth K (2014) Natural Neural Projection Dynamics Underlying Social Behavior Cell 157(7): 1535 - 1551 |
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Cheng MY, Wang EH, Woodson WJ, Wang S, Sun G, Lee AG, Arac A, Fenno LE, Deisseroth K, Steinberg GK (2014) Optogenetic neuronal stimulation promotes functional recovery after stroke. Proc Natl Acad Sci U S A 111:12913-8 PMC4156770 pubmed |
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Fenno LE, Mattis J, Ramakrishnan C, Hyun M, Lee SY, He M, Tucciarone J, Selimbeyoglu A, Berndt A, Grosenick L, Zalocusky KA, Bernstein H, Swanson H, Perry C, Diester I, Boyce FM, Bass CE, Neve R, Huang ZJ, Deisseroth K (2014) Targeting cells with single vectors using multiple-feature Boolean logic. Nat Methods 11:763-72 PMC4085277 pubmed |
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Gunaydin LA, Grosenick L, Finkelstein JC, Kauvar IV, Fenno LE, Adhikari A, Lammel S, Mirzabekov JJ, Airan RD, Zalocusky KA, Tye KM, Anikeeva P, Malenka RC, Deisseroth K (2014) Natural neural projection dynamics underlying social behavior. Cell 157:1535-51 PMC4123133 pubmed |
Prakash, Rohit (2008 - 2012) |
Deisseroth |
Prakash R, Ricci AJ (2008) Hair bundles teaming up to tune the mammalian cochlea. Proc Natl Acad Sci U S A 105:18651-2 PMC2596205 pubmed |
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Gradinaru V, Zhang F, Ramakrishnan C, Mattis J, Prakash R, Diester I, Goshen I, Thompson KR, Deisseroth K (2010) Molecular and cellular approaches for diversifying and extending optogenetics. Cell 141:154-65 PMC4160532 pubmed |
|
|
Witten IB, Lin SC, Brodsky M, Prakash R, Diester I, Anikeeva P, Gradinaru V, Ramakrishnan C, Deisseroth K (2010) Cholinergic interneurons control local circuit activity and cocaine conditioning. Science 330:1677-81 PMC3142356 pubmed |
|
|
Tye KM, Prakash R, Kim S-Y, Fenno LE, Grosenick L, Zarabi H, Thompson KR, Gradinaru V, Ramakrishnan C, Deisseroth K (2011) Amygdala circuitry mediating reversible and bidirectional control of anxiety. Nature 471:358-62 PMC3154022 pubmed |
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Abilez OJ, Wong J, Prakash R, Deisseroth K, Zarins CK, Kuhl E (2011) Multiscale computational models for optogenetic control of cardiac function. Biophys J 101:1326-34 PMC3177076 pubmed |
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Goshen I, Brodsky M, Prakash R, Wallace J, Gradinaru V, Ramakrishnan C, Deisseroth K (2011) Dynamics of retrieval strategies for remote memories. Cell 147:678-89 pubmed |
|
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Mattis J, Tye KM, Ferenczi EA, Ramakrishnan C, O'Shea DJ, Prakash R, Gunaydin LA, Hyun M, Fenno LE, Gradinaru V, Yizhar O, Deisseroth K (2012) Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins. Nat Methods 9:159-72 PMC4165888 pubmed |
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Packer AM, Peterka DS, Hirtz JJ, Prakash R, Deisseroth K, Yuste R (2012) Two-photon optogenetics of dendritic spines and neural circuits. Nat Methods 9:1202-5 PMC3518588 pubmed |
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Prakash R, Yizhar O, Grewe B, Ramakrishnan C, Wang N, Goshen I, Packer AM, Peterka DS, Yuste R, Schnitzer MJ, Deisseroth K (2012) Two-photon optogenetic toolbox for fast inhibition, excitation and bistable modulation. Nat Methods : pubmed |
Kim, Sung-Yon (2009 - 2013) |
Deisseroth |
Tye KM, Prakash R, Kim S-Y, Fenno LE, Grosenick L, Zarabi H, Thompson KR, Gradinaru V, Ramakrishnan C, Deisseroth K (2011) Amygdala circuitry mediating reversible and bidirectional control of anxiety. Nature 471:358-62 PMC3154022 pubmed |
|
|
Tye KM, Mirzabekov JJ, Warden MR, Ferenczi EA, Tsai HC, Finkelstein J, Kim SY, Adhikari A, Thompson KR, Andalman AS, Gunaydin LA, Witten IB, Deisseroth K (2013) Dopamine neurons modulate neural encoding and expression of depression-related behaviour. Nature 493:537-41 PMC4160519 pubmed |
|
|
Kim SY, Adhikari A, Lee SY, Marshel JH, Kim CK, Mallory CS, Lo M, Pak S, Mattis J, Lim BK, Malenka RC, Warden MR, Neve R, Tye KM, Deisseroth K (2013) Diverging neural pathways assemble a behavioural state from separable features in anxiety. Nature 496:219-23 pubmed |
|
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Chung K, Wallace J, Kim SY, Kalyanasundaram S, Andalman AS, Davidson TJ, Mirzabekov JJ, Zalocusky KA, Mattis J, Denisin AK, Pak S, Bernstein H, Ramakrishnan C, Grosenick L, Gradinaru V, Deisseroth K (2013) Structural and molecular interrogation of intact biological systems. Nature 497:332-7 PMC4092167 pubmed |
Mattis, Joanna Hochberg (2009 - 2013) |
Deisseroth |
Zhang F, Prigge M, Beyrière F, Tsunoda SP, Mattis J, Yizhar O, Hegemann P, Deisseroth K (2008) Red-shifted optogenetic excitation: a tool for fast neural control derived from Volvox carteri. Nat Neurosci 11:631-3 PMC2692303 pubmed |
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Gradinaru V, Zhang F, Ramakrishnan C, Mattis J, Prakash R, Diester I, Goshen I, Thompson KR, Deisseroth K (2010) Molecular and cellular approaches for diversifying and extending optogenetics. Cell 141:154-65 PMC4160532 pubmed |
|
|
Berndt A, Schoenenberger P, Mattis J, Tye KM, Deisseroth K, Hegemann P, Oertner TG (2011) High-efficiency channelrhodopsins for fast neuronal stimulation at low light levels. Proc Natl Acad Sci U S A 108:7595-600 PMC3088623 pubmed |
|
|
Mattis J, Tye KM, Ferenczi EA, Ramakrishnan C, O'Shea DJ, Prakash R, Gunaydin LA, Hyun M, Fenno LE, Gradinaru V, Yizhar O, Deisseroth K (2012) Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins. Nat Methods 9:159-72 PMC4165888 pubmed |
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Stamatakis AM, Jennings JH, Ung RL, Blair GA, Weinberg RJ, Neve RL, Boyce F, Mattis J, Ramakrishnan C, Deisseroth K, Stuber GD (2013) A unique population of ventral tegmental area neurons inhibits the lateral habenula to promote reward. Neuron 80:1039-53 PMC3873746 |
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Kim SY, Adhikari A, Lee SY, Marshel JH, Kim CK, Mallory CS, Lo M, Pak S, Mattis J, Lim BK, Malenka RC, Warden MR, Neve R, Tye KM, Deisseroth K (2013) Diverging neural pathways assemble a behavioural state from separable features in anxiety. Nature 496:219-23 pubmed |
|
|
Chung K, Wallace J, Kim SY, Kalyanasundaram S, Andalman AS, Davidson TJ, Mirzabekov JJ, Zalocusky KA, Mattis J, Denisin AK, Pak S, Bernstein H, Ramakrishnan C, Grosenick L, Gradinaru V, Deisseroth K (2013) Structural and molecular interrogation of intact biological systems. Nature 497:332-7 PMC4092167 pubmed |
|
|
Fenno LE, Mattis J, Ramakrishnan C, Hyun M, Lee SY, He M, Tucciarone J, Selimbeyoglu A, Berndt A, Grosenick L, Zalocusky KA, Bernstein H, Swanson H, Perry C, Diester I, Boyce FM, Bass CE, Neve R, Huang ZJ, Deisseroth K (2014) Targeting cells with single vectors using multiple-feature Boolean logic. Nat Methods 11:763-72 PMC4085277 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Scanlon, Michael (2002 - 2007; M.S.) |
Fernald |
Bunge SA, Hazeltine E, Scanlon MD, Rosen AC, Gabrieli JD (2002) Dissociable contributions of prefrontal and parietal cortices to response selection. Neuroimage 17:1562-71 PMID:12414294pubmed |
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Hairston IS, Little MT, Scanlon MD, Barakat MT, Palmer TD, Sapolsky RM, Heller HC (2005) Sleep restriction suppresses neurogenesis induced by hippocampus-dependent learning. J Neurophysiol 94:4224-33 PMID:16014798 pubmed |
Chen, Chun-Chun (2003 - 2008) |
Fernald |
Chen CC, Fernald RD (2006) Distributions of two gonadotropin-releasing hormone receptor types in a cichlid fish suggest functional specialization. J Comp Neurol 495:314-23 PMID:16440293pubmed |
|
|
Flanagan CA, Chen CC, Coetsee M, Mamputha S, Whitlock KE, Bredenkamp N, Grosenick L, Fernald RD, Illing N (2007) Expression, structure, function, and evolution of gonadotropin-releasing hormone (GnRH) receptors GnRH-R1SHS and GnRH-R2PEY in the teleost, Astatotilapia burtoni. Endocrinology 148:5060-71 pubmed |
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Zhao S, Korzan WJ, Chen CC, Fernald RD (2008) Heterogeneous nuclear ribonucleoprotein A/B and G inhibits the transcription of gonadotropin-releasing-hormone 1. Mol Cell Neurosci 37:69-84 PMC2262047 pubmed |
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Chen CC, Fernald RD (2008) Sequences, expression patterns and regulation of the corticotropin-releasing factor system in a teleost. Gen Comp Endocrinol 157:148-55 PMC3357958 pubmed |
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Chen CC, Fernald RD (2011) Visual information alone changes behavior and physiology during social interactions in a cichlid fish (Astatotilapia burtoni). PLoS One 6:e20313 PMC3102105 pubmed |
Olin, Christopher (2006 - 2009; M.S.) |
Fernald |
Britschgi M, Olin CE, Johns HT, Takeda-Uchimura Y, LeMieux MC, Rufibach K, Rajadas J, Zhang H, Tomooka B, Robinson WH, Clark CM, Fagan AM, Galasko DR, Holtzman DM, Jutel M, Kaye JA, Lemere CA, Leszek J, Li G, Peskind ER, Quinn JF, Wyss-Coray T (2009) Neuroprotective natural antibodies to assemblies of amyloidogenic peptides decrease with normal aging and advancing Alzheimer's disease. Proc Natl Acad Sci U S A 106:12145-50 PMC2715538 pubmed |
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|
|
Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Scanlon, Michael (2002 - 2007; M.S.) |
Fernald |
Bunge SA, Hazeltine E, Scanlon MD, Rosen AC, Gabrieli JD (2002) Dissociable contributions of prefrontal and parietal cortices to response selection. Neuroimage 17:1562-71 PMID:12414294pubmed |
|
|
Hairston IS, Little MT, Scanlon MD, Barakat MT, Palmer TD, Sapolsky RM, Heller HC (2005) Sleep restriction suppresses neurogenesis induced by hippocampus-dependent learning. J Neurophysiol 94:4224-33 PMID:16014798 pubmed |
Chen, Chun-Chun (2003 - 2008) |
Fernald |
Chen CC, Fernald RD (2006) Distributions of two gonadotropin-releasing hormone receptor types in a cichlid fish suggest functional specialization. J Comp Neurol 495:314-23 PMID:16440293pubmed |
|
|
Flanagan CA, Chen CC, Coetsee M, Mamputha S, Whitlock KE, Bredenkamp N, Grosenick L, Fernald RD, Illing N (2007) Expression, structure, function, and evolution of gonadotropin-releasing hormone (GnRH) receptors GnRH-R1SHS and GnRH-R2PEY in the teleost, Astatotilapia burtoni. Endocrinology 148:5060-71 pubmed |
|
|
Zhao S, Korzan WJ, Chen CC, Fernald RD (2008) Heterogeneous nuclear ribonucleoprotein A/B and G inhibits the transcription of gonadotropin-releasing-hormone 1. Mol Cell Neurosci 37:69-84 PMC2262047 pubmed |
|
|
Chen CC, Fernald RD (2008) Sequences, expression patterns and regulation of the corticotropin-releasing factor system in a teleost. Gen Comp Endocrinol 157:148-55 PMC3357958 pubmed |
|
|
Chen CC, Fernald RD (2011) Visual information alone changes behavior and physiology during social interactions in a cichlid fish (Astatotilapia burtoni). PLoS One 6:e20313 PMC3102105 pubmed |
Olin, Christopher (2006 - 2009; M.S.) |
Fernald |
Britschgi M, Olin CE, Johns HT, Takeda-Uchimura Y, LeMieux MC, Rufibach K, Rajadas J, Zhang H, Tomooka B, Robinson WH, Clark CM, Fagan AM, Galasko DR, Holtzman DM, Jutel M, Kaye JA, Lemere CA, Leszek J, Li G, Peskind ER, Quinn JF, Wyss-Coray T (2009) Neuroprotective natural antibodies to assemblies of amyloidogenic peptides decrease with normal aging and advancing Alzheimer's disease. Proc Natl Acad Sci U S A 106:12145-50 PMC2715538 pubmed |
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|
Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Austin, Jenifer Elizabeth (2000 - 2005; M.S.) |
Garner |
Austin JE, Buckmaster PS (2004) Recurrent excitation of granule cells with basal dendrites and low interneuron density and inhibitory postsynaptic current frequency in the dentate gyrus of macaque monkeys. J Comp Neurol 476:205-18 PMID:15269966 pubmed |
Fernandez, Fabian (2002 - 2007) |
Garner |
Fernandez F, Morishita W, Zuniga E, Nguyen J, Blank M, Malenka RC, Garner CC (2007) Pharmacotherapy for cognitive impairment in a mouse model of Down syndrome. Nat Neurosci 10:411-3pubmed |
|
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Fernandez F, Garner CC (2007) Object recognition memory is conserved in Ts1Cje, a mouse model of Down syndrome. Neurosci Lett 421:137-41 pubmed |
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Fernandez F, Garner CC (2007) Over-inhibition: a model for developmental intellectual disability. Trends Neurosci 30:497-503 pubmed |
|
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Fernandez F, Garner CC (2008) Episodic-like memory in Ts65Dn, a mouse model of Down syndrome. Behav Brain Res 188:233-7 PMC3230531 pubmed |
|
|
Ruby NF, Hwang CE, Wessells C, Fernandez F, Zhang P, Sapolsky R, Heller HC (2008) Hippocampal-dependent learning requires a functional circadian system. Proc Natl Acad Sci U S A 105:15593-8 PMC2563080 pubmed |
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Fernandez F, Trinidad JC, Blank M, Feng DD, Burlingame AL, Garner CC (2009) Normal protein composition of synapses in Ts65Dn mice: a mouse model of Down syndrome. J Neurochem 110:157-69 PMC2735138 pubmed |
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Ruby NF, Fernandez F, Garrett A, Klima J, Zhang P, Sapolsky R, Heller HC (2013) Correction: Spatial Memory and Long-Term Object Recognition Are Impaired by Circadian Arrhythmia and Restored by the GABAAAntagonist Pentylenetetrazole. PLoS One 8: PMC3805630 pubmed |
Arons, Magali Holt (née Rowan) (2007 - 2012) |
Garner |
Grabrucker AM, Knight MJ, Proepper C, Bockmann J, Joubert M, Rowan M, Nienhaus GU, Garner CC, Bowie JU, Kreutz MR, Gundelfinger ED, Boeckers TM (2011) Concerted action of zinc and ProSAP/Shank in synaptogenesis and synapse maturation. EMBO J 30:569-81 PMC3034012 pubmed |
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Grabrucker AM, Schmeisser MJ, Udvardi PT, Arons M, Schoen M, Woodling NS, Andreasson KI, Hof PR, Buxbaum JD, Garner CC, Boeckers TM (2011) Amyloid beta protein-induced zinc sequestration leads to synaptic loss via dysregulation of the ProSAP2/Shank3 scaffold. Mol Neurodegener 6:65 PMC3189132 pubmed |
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Grabrucker AM, Rowan M, Garner CC (2011) Brain-Delivery of Zinc-Ions as Potential Treatment for Neurological Diseases: Mini Review. Drug Deliv Lett 1:13-23 PMC3220161 pubmed |
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Arons MH, Thynne CJ, Grabrucker AM, Li D, Schoen M, Cheyne JE, Boeckers TM, Montgomery JM, Garner CC (2012) Autism-associated mutations in ProSAP2/Shank3 impair synaptic transmission and neurexin-neuroligin-mediated transsynaptic signaling. J Neurosci 32:14966-78 PMC3752148 pubmed |
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|
Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Austin, Jenifer Elizabeth (2000 - 2005; M.S.) |
Garner |
Austin JE, Buckmaster PS (2004) Recurrent excitation of granule cells with basal dendrites and low interneuron density and inhibitory postsynaptic current frequency in the dentate gyrus of macaque monkeys. J Comp Neurol 476:205-18 PMID:15269966 pubmed |
Fernandez, Fabian (2002 - 2007) |
Garner |
Fernandez F, Morishita W, Zuniga E, Nguyen J, Blank M, Malenka RC, Garner CC (2007) Pharmacotherapy for cognitive impairment in a mouse model of Down syndrome. Nat Neurosci 10:411-3pubmed |
|
|
Fernandez F, Garner CC (2007) Object recognition memory is conserved in Ts1Cje, a mouse model of Down syndrome. Neurosci Lett 421:137-41 pubmed |
|
|
Fernandez F, Garner CC (2007) Over-inhibition: a model for developmental intellectual disability. Trends Neurosci 30:497-503 pubmed |
|
|
Fernandez F, Garner CC (2008) Episodic-like memory in Ts65Dn, a mouse model of Down syndrome. Behav Brain Res 188:233-7 PMC3230531 pubmed |
|
|
Ruby NF, Hwang CE, Wessells C, Fernandez F, Zhang P, Sapolsky R, Heller HC (2008) Hippocampal-dependent learning requires a functional circadian system. Proc Natl Acad Sci U S A 105:15593-8 PMC2563080 pubmed |
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Fernandez F, Trinidad JC, Blank M, Feng DD, Burlingame AL, Garner CC (2009) Normal protein composition of synapses in Ts65Dn mice: a mouse model of Down syndrome. J Neurochem 110:157-69 PMC2735138 pubmed |
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Ruby NF, Fernandez F, Garrett A, Klima J, Zhang P, Sapolsky R, Heller HC (2013) Correction: Spatial Memory and Long-Term Object Recognition Are Impaired by Circadian Arrhythmia and Restored by the GABAAAntagonist Pentylenetetrazole. PLoS One 8: PMC3805630 pubmed |
Arons, Magali Holt (née Rowan) (2007 - 2012) |
Garner |
Grabrucker AM, Knight MJ, Proepper C, Bockmann J, Joubert M, Rowan M, Nienhaus GU, Garner CC, Bowie JU, Kreutz MR, Gundelfinger ED, Boeckers TM (2011) Concerted action of zinc and ProSAP/Shank in synaptogenesis and synapse maturation. EMBO J 30:569-81 PMC3034012 pubmed |
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Grabrucker AM, Schmeisser MJ, Udvardi PT, Arons M, Schoen M, Woodling NS, Andreasson KI, Hof PR, Buxbaum JD, Garner CC, Boeckers TM (2011) Amyloid beta protein-induced zinc sequestration leads to synaptic loss via dysregulation of the ProSAP2/Shank3 scaffold. Mol Neurodegener 6:65 PMC3189132 pubmed |
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Grabrucker AM, Rowan M, Garner CC (2011) Brain-Delivery of Zinc-Ions as Potential Treatment for Neurological Diseases: Mini Review. Drug Deliv Lett 1:13-23 PMC3220161 pubmed |
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Arons MH, Thynne CJ, Grabrucker AM, Li D, Schoen M, Cheyne JE, Boeckers TM, Montgomery JM, Garner CC (2012) Autism-associated mutations in ProSAP2/Shank3 impair synaptic transmission and neurexin-neuroligin-mediated transsynaptic signaling. J Neurosci 32:14966-78 PMC3752148 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Kirschen, Matthew Philip (2002 - 2005) |
Glover |
Illes J, Kirschen MP, Karetsky K, Kelly M, Saha A, Desmond JE, Raffin TA, Glover GH, Atlas SW (2004) Discovery and disclosure of incidental findings in neuroimaging research. J Magn Reson Imaging 20:743-7 PMC1506385 pubmed |
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Kirschen MP, Chen SH, Schraedley-Desmond P, Desmond JE (2005) Load- and practice-dependent increases in cerebro-cerebellar activation in verbal working memory: an fMRI study. Neuroimage 24:462-72 PMID:15627588 pubmed |
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Kirschen MP, Jaworska A, Illes J (2006) Subjects' expectations in neuroimaging research. J Magn Reson Imaging 23:205-9 PMC1560341 pubmed |
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Illes J, Kirschen MP, Edwards E, Stanford LR, Bandettini P, Cho MK, Ford PJ, Glover GH, Kulynych J, Macklin R, Michael DB, Wolf SM (2006) Ethics. Incidental findings in brain imaging research. Science 311:783-4 PMC1524853 pubmed |
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Illes J, Gallo M, Kirschen MP (2006) An ethics perspective on transcranial magnetic stimulation (TMS) and human neuromodulation. Behav Neurol 17:149-57 PMID:17148834 pubmed |
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Kirschen MP, Davis-Ratner MS, Jerde TE, Schraedley-Desmond P, Desmond JE (2006) Enhancement of phonological memory following transcranial magnetic stimulation (TMS). Behav Neurol 17:187-94 PMID:17148839 pubmed |
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Illes J, Kirschen MP, Edwards E, Bandettini P, Cho MK, Ford PJ, Glover GH, Kulynych J, Macklin R, Michael DB, Wolf SM, Grabowski T, Seto B (2008) Practical approaches to incidental findings in brain imaging research. Neurology 70:384-90 PMC2605078 pubmed |
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Kirschen MP, Davis-Ratner MS, Milner MW, Chen SH, Schraedley-Desmond P, Fisher PG, Desmond JE (2008) Verbal memory impairments in children after cerebellar tumor resection. Behav Neurol 20:39-53 PMC2745108 pubmed |
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Kirschen MP, Chen SH, Desmond JE (2010) Modality specific cerebro-cerebellar activations in verbal working memory: an fMRI study. Behav Neurol 23:51-63 PMC2944406 pubmed |
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Beslow LA, Kasner SE, Smith SE, Mullen MT, Kirschen MP, Bastian RA, Dowling MM, Lo W, Jordan LC, Bernard TJ, Friedman N, DeVeber G, Kirton A, Abraham L, Licht DJ, Jawad AF, Ellenberg JH, Lautenbach E, Ichord RN (2012) Concurrent validity and reliability of retrospective scoring of the Pediatric National Institutes of Health Stroke Scale. Stroke 43:341-5 PMC3265644 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Ramot, Daniel (2002 - 2007) |
Goodman |
Chalasani SH, Chronis N, Tsunozaki M, Gray JM, Ramot D, Goodman MB, Bargmann CI (2007) Dissecting a circuit for olfactory behaviour in Caenorhabditis elegans. Nature 450:63-70 pubmed |
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Ramot D, Johnson BE, Berry TL, Carnell L, Goodman MB (2008) The Parallel Worm Tracker: a platform for measuring average speed and drug-induced paralysis in nematodes. PLoS One 3:e2208 PMC2373883 pubmed |
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Ramot D, MacInnis BL, Goodman MB (2008) Bidirectional temperature-sensing by a single thermosensory neuron in C. elegans. Nat Neurosci 11:908-15 PMC2587641 pubmed |
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Ramot D, MacInnis BL, Lee HC, Goodman MB (2008) Thermotaxis is a robust mechanism for thermoregulation in Caenorhabditis elegans nematodes. J Neurosci 28:12546-57 PMC3899394 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Sayres, Rory (2001 - 2007) |
Grill-Spector |
Sayres R, Grill-Spector K (2006) Object-selective cortex exhibits performance-independent repetition suppression. J Neurophysiol 95:995-1007 PMID:16236787 pubmed |
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Grill-Spector K, Sayres R, Ress D (2006) High-resolution imaging reveals highly selective nonface clusters in the fusiform face area. Nat Neurosci 9:1177-85 PMID:16892057 pubmed |
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Sayres R, Grill-Spector K (2008) Relating retinotopic and object-selective responses in human lateral occipital cortex. J Neurophysiol 100:249-67 PMC2493478 pubmed |
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Weiner KS, Sayres R, Vinberg J, Grill-Spector K (2010) fMRI-adaptation and category selectivity in human ventral temporal cortex: regional differences across time scales. J Neurophysiol 103:3349-65 PMC2888251 pubmed |
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Winawer J, Horiguchi H, Sayres RA, Amano K, Wandell BA (2010) Mapping hV4 and ventral occipital cortex: the venous eclipse. J Vis 10:1 PMC3033222 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Drabant, Emily Marguerite (2005 - 2010) |
Gross |
Drabant EM, McRae K, Manuck SB, Hariri AR, Gross JJ (2009) Individual differences in typical reappraisal use predict amygdala and prefrontal responses. Biol Psychiatry 65:367-73 PMC2855682pubmed |
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Edge MD, Ramel W, Drabant EM, Kuo JR, Parker KJ, Gross JJ (2009) For better or worse? Stress inoculation effects for implicit but not explicit anxiety. Depress Anxiety 26:831-7 PMC3364103pubmed |
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Fredericks CA, Drabant EM, Edge MD, Tillie JM, Hallmayer J, Ramel W, Kuo JR, Mackey S, Gross JJ, Dhabhar FS (2010) Healthy young women with serotonin transporter SS polymorphism show a pro-inflammatory bias under resting and stress conditions. Brain Behav Immun 24:350-7 PMC2826575 pubmed |
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Drabant EM, Kuo JR, Ramel W, Blechert J, Edge MD, Cooper JR, Goldin PR, Hariri AR, Gross JJ (2011) Experiential, autonomic, and neural responses during threat anticipation vary as a function of threat intensity and neuroticism. Neuroimage 55:401-10 PMC3031673 pubmed |
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Giuliani NR, Drabant EM, Gross JJ (2011) Anterior cingulate cortex volume and emotion regulation: is bigger better? Biol Psychol 86:379-82 PMC3051027 pubmed |
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Giuliani NR, Drabant EM, Bhatnagar R, Gross JJ (2011) Emotion regulation and brain plasticity: expressive suppression use predicts anterior insula volume. Neuroimage 58:10-5 PMC3161031pubmed |
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Drabant EM, Ramel W, Edge MD, Hyde LW, Kuo JR, Goldin PR, Hariri AR, Gross JJ (2012) Neural mechanisms underlying 5-HTTLPR-related sensitivity to acute stress. Am J Psychiatry 169:397-405 NIHMSID 507961 pubmed |
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Minkel JD, McNealy K, Gianaros PJ, Drabant EM, Gross JJ, Manuck SB, Hariri AR (2012) Sleep quality and neural circuit function supporting emotion regulation. Biol Mood Anxiety Disord 2:22 PMC3542038 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Bennett, Corbett Clark (née Howe) (2009 - 2015) |
Hestrin |
Arroyo S, Bennett C, Aziz D, Brown SP, Hestrin S (2012) Prolonged disynaptic inhibition in the cortex mediated by slow, non-α7 nicotinic excitation of a specific subset of cortical interneurons. J Neurosci 32:3859-64 PMC3320796 pubmed |
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Bennett C, Arroyo S, Berns D, Hestrin S (2012) Mechanisms Generating Dual-Component Nicotinic EPSCs in Cortical Interneurons. J Neurosci 32:17287-96 PMC3525105 pubmed |
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Bennett C, Arroyo S, Hestrin S (2013) Subthreshold mechanisms underlying state-dependent modulation of visual responses. Neuron 80:350-7 PMC3806653 pubmed |
Arroyo, Sergio Estevan (2011 - 2014) |
Hestrin |
Arroyo S, Bennett C, Aziz D, Brown SP, Hestrin S (2012) Prolonged disynaptic inhibition in the cortex mediated by slow, non-α7 nicotinic excitation of a specific subset of cortical interneurons. J Neurosci 32:3859-64 PMC3320796 pubmed |
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Bennett C, Arroyo S, Berns D, Hestrin S (2012) Mechanisms Generating Dual-Component Nicotinic EPSCs in Cortical Interneurons. J Neurosci 32:17287-96 PMC3525105 pubmed |
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Bennett C, Arroyo S, Hestrin S (2013) Subthreshold mechanisms underlying state-dependent modulation of visual responses. Neuron 80:350-7 PMC3806653 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Sohal, Vikaas Singh (2000 - 2005) |
Huguenard |
Sohal VS, Cox CL, Huguenard JR (1998) Localization of CCK receptors in thalamic reticular neurons: a modeling study. J Neurophysiol 79:2820-4 PMID:9582249 pubmed |
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Sohal VS, Huguenard JR (1998) Long-range connections synchronize rather than spread intrathalamic oscillations: computational modeling and in vitro electrophysiology. J Neurophysiol 80:1736-51 PMID:9772235 pubmed |
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Sohal VS, Huntsman MM, Huguenard JR (2000) Reciprocal inhibitory connections regulate the spatiotemporal properties of intrathalamic oscillations. J Neurosci 20:1735-45 PMID:10684875 pubmed |
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Sohal VS, Huguenard JR (2001) It takes T to tango. Neuron 31:3-4 PMID:11498042 pubmed |
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Sohal VS, Keist R, Rudolph U, Huguenard JR (2003) Dynamic GABA(A) receptor subtype-specific modulation of the synchrony and duration of thalamic oscillations. J Neurosci 23:3649-57 PMID:12736336 pubmed |
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Sohal VS, Huguenard JR (2003) Inhibitory interconnections control burst pattern and emergent network synchrony in reticular thalamus. J Neurosci 23:8978-88 PMID:14523100 pubmed |
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Sohal VS, Huguenard JR (2005) Inhibitory coupling specifically generates emergent gamma oscillations in diverse cell types. Proc Natl Acad Sci U S A 102:18638-43 PMC1317969 pubmed |
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Sohal VS, Pangratz-Fuehrer S, Rudolph U, Huguenard JR (2006) Intrinsic and synaptic dynamics interact to generate emergent patterns of rhythmic bursting in thalamocortical neurons. J Neurosci 26:4247-55 PMID:16624945 pubmed |
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Gunaydin LA, Yizhar O, Berndt A, Sohal VS, Deisseroth K, Hegemann P (2010) Ultrafast optogenetic control. Nat Neurosci 13:387-92 pubmed |
Bryant, Astra Shamgar (2009 - 2014) |
Knudsen & Huguenard |
Bryant AS, Li B, Beenhakker MP, Huguenard JR (2009) Maintenance of thalamic epileptiform activity depends on the astrocytic glutamate-glutamine cycle. J Neurophysiol 102:2880-8 PMC2777838pubmed |
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Paz JT, Bryant AS, Peng K, Fenno L, Yizhar O, Frankel WN, Deisseroth K, Huguenard JR (2011) A new mode of corticothalamic transmission revealed in the Gria4(-/-) model of absence epilepsy. Nat Neurosci 14:1167-73 PMC3308017 pubmed |
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Lacey CJ, Bryant A, Brill J, Huguenard JR (2012) Enhanced NMDA receptor-dependent thalamic excitation and network oscillations in stargazer mice. J Neurosci 32:11067-81 PMC3430525 pubmed |
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Goddard CA, Mysore SP, Bryant AS, Huguenard JR, Knudsen EI (2014) Spatially Reciprocal Inhibition of Inhibition within a Stimulus Selection Network in the Avian Midbrain. PLoS One 9:e85865 PMC3897538 pubmed |
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Bryant AS, Goddard CA, Huguenard JR, Knudsen EI (2015) Cholinergic control of gamma power in the midbrain spatial attention network. J Neurosci 35:761-75 PMC4293421 pubmed |
Lee, Christine Kyuyoung (2009 - 2015) |
Huguenard |
Lee CK, Huguenard JR (2011) Martinotti cells: community organizers. Neuron 69:1042-5 PMC3068616 pubmed |
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Kyuyoung CL, Huguenard JR (2014) Modulation of Short-Term Plasticity in the Corticothalamic Circuit by Group III Metabotropic Glutamate Receptors. J Neurosci 34:675-87 PMC3870944 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Pollen, Alexander Aaron (2006 - 2012) |
Kingsley |
Miller CT, Beleza S, Pollen AA, Schluter D, Kittles RA, Shriver MD, Kingsley DM (2007) cis-Regulatory changes in Kit ligand expression and parallel evolution of pigmentation in sticklebacks and humans. Cell 131:1179-89 PMC2900316 pubmed |
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Pollen AA, Hofmann HA (2008) Beyond neuroanatomy: novel approaches to studying brain evolution. Brain Behav Evol 72:145-58 N/A did not use NIH funds and was a review paper pubmed |
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Machado HE, Pollen AA, Hofmann HA, Renn SC (2009) Interspecific profiling of gene expression informed by comparative genomic hybridization: A review and a novel approach in African cichlid fishes. Integr Comp Biol 49:644-59 N/A: Not supported by Training Grant at the time pubmed |
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McLean CY, Reno PL, Pollen AA, Bassan AI, Capellini TD, Guenther C, Indjeian VB, Lim X, Menke DB, Schaar BT, Wenger AM, Bejerano G, Kingsley DM (2011) Human-specific loss of regulatory DNA and the evolution of human-specific traits. Nature 471:216-9 PMC3071156 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Bergan, Joseph (2001 - 2007) |
Knudsen |
Bergan JF, Ro P, Ro D, Knudsen EI (2005) Hunting increases adaptive auditory map plasticity in adult barn owls. J Neurosci 25:9816-20 PMID:16237185 pubmed |
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Witten IB, Bergan JF, Knudsen EI (2006) Dynamic shifts in the owl's auditory space map predict moving sound location. Nat Neurosci 9:1439-45 PMID:17013379 pubmed |
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Bergan JF, Knudsen EI (2009) Visual modulation of auditory responses in the owl inferior colliculus. J Neurophysiol 101:2924-33 PMC2694124 pubmed |
Maczko, Kristin (2002 - 2008) |
Knudsen |
Maczko KA, Knudsen PF, Knudsen EI (2006) Auditory and visual space maps in the cholinergic nucleus isthmi pars parvocellularis of the barn owl. J Neurosci 26:12799-806 PMID:17151283 pubmed |
Witten, Ilana (2002 - 2008) |
Knudsen |
Witten IB, Knudsen EI (2005) Why seeing is believing: merging auditory and visual worlds. Neuron 48:489-96 PMID:16269365 pubmed |
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Witten IB, Bergan JF, Knudsen EI (2006) Dynamic shifts in the owl's auditory space map predict moving sound location. Nat Neurosci 9:1439-45 PMID:17013379 pubmed |
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Witten IB, Knudsen EI, Sompolinsky H (2008) A Hebbian learning rule mediates asymmetric plasticity in aligning sensory representations. J Neurophysiol 100:1067-79 PMC2525701 pubmed |
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Witten IB, Knudsen PF, Knudsen EI (2010) A dominance hierarchy of auditory spatial cues in barn owls. PLoS One 5:e10396 PMC2861002 pubmed |
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Witten IB, Lin SC, Brodsky M, Prakash R, Diester I, Anikeeva P, Gradinaru V, Ramakrishnan C, Deisseroth K (2010) Cholinergic interneurons control local circuit activity and cocaine conditioning. Science 330:1677-81 PMC3142356 pubmed |
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Witten IB, Steinberg EE, Lee SY, Davidson TJ, Zalocusky KA, Brodsky M, Yizhar O, Cho SL, Gong S, Ramakrishnan C, Stuber GD, Tye KM, Janak PH, Deisseroth K (2011) Recombinase-driver rat lines: tools, techniques, and optogenetic application to dopamine-mediated reinforcement. Neuron 72:721-33 PMC3282061 pubmed |
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Anikeeva P, Andalman AS, Witten I, Warden M, Goshen I, Grosenick L, Gunaydin LA, Frank LM, Deisseroth K (2012) Optetrode: a multichannel readout for optogenetic control in freely moving mice. Nat Neurosci 15:163-70 PMC4164695 pubmed |
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Tye KM, Mirzabekov JJ, Warden MR, Ferenczi EA, Tsai HC, Finkelstein J, Kim SY, Adhikari A, Thompson KR, Andalman AS, Gunaydin LA, Witten IB, Deisseroth K (2013) Dopamine neurons modulate neural encoding and expression of depression-related behaviour. Nature 493:537-41 PMC4160519 pubmed |
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DePuy SD, Stornetta RL, Bochorishvili G, Deisseroth K, Witten I, Coates M, Guyenet PG (2013) Glutamatergic neurotransmission between the C1 neurons and the parasympathetic preganglionic neurons of the dorsal motor nucleus of the vagus. J Neurosci 33:1486-97 PMC3727439 pubmed |
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Steinberg EE, Keiflin R, Boivin JR, Witten IB, Deisseroth K, Janak PH (2013) A causal link between prediction errors, dopamine neurons and learning. Nat Neurosci 16:966-73 PMC3705924 pubmed |
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Dautan D, Huerta-Ocampo I, Witten IB, Deisseroth K, Bolam JP, Gerdjikov T, Mena-Segovia J (2014) A major external source of cholinergic innervation of the striatum and nucleus accumbens originates in the brainstem. J Neurosci 34:4509-18 PMC3965779 pubmed |
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Steinberg EE, Boivin JR, Saunders BT, Witten IB, Deisseroth K, Janak PH (2014) Positive reinforcement mediated by midbrain dopamine neurons requires D1 and D2 receptor activation in the nucleus accumbens. PLoS One 9:e94771 PMC3986242 pubmed |
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McCutcheon JE, Cone JJ, Sinon CG, Fortin SM, Kantak PA, Witten IB, Deisseroth K, Stuber GD, Roitman MF (2014) Optical suppression of drug-evoked phasic dopamine release. Front Neural Circuits 8:114 PMC4166314 pubmed |
Sridharan, Devarajan (2004 - 2010) |
Boahen and Knudsen |
Sridharan D, Levitin DJ, Chafe CH, Berger J, Menon V (2007) Neural dynamics of event segmentation in music: converging evidence for dissociable ventral and dorsal networks. Neuron 55:521-32pubmed |
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Sridharan D, Percival B, Arthur J, Boahen K (2008) An in-silico model of dynamic routing through neuronal coherence. Advances in Neural Information Processing Systems 20 1401-1408 |
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Sridharan D, Levitin DJ, Menon V (2008) A critical role for the right fronto-insular cortex in switching between central-executive and default-mode networks. Proc Natl Acad Sci U S A 105:12569-74 PMC2527952 pubmed |
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Sridharan D, Boahen K, Knudsen EI (2011) Space coding by gamma oscillations in the barn owl optic tectum. J Neurophysiol 105:2005-17 PMC3094170 pubmed |
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Goddard CA, Sridharan D, Huguenard JR, Knudsen EI (2012) Gamma oscillations are generated locally in an attention-related midbrain network. Neuron 73:567-80 PMC3291715 pubmed |
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Sridharan D, Ramamurthy DL, Knudsen EI (2013) Spatial probability dynamically modulates visual target detection in chickens. PLoS One 8:e64136 PMC3667102 pubmed |
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Schwarz JS, Sridharan D, Knudsen EI (2013) Magnetic tracking of eye position in freely behaving chickens. Front Syst Neurosci 7:91 PMC3833096 pubmed |
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Sridharan D, Ramamurthy DL, Schwarz JS, Knudsen EI (2014) Visuospatial selective attention in chickens. Proc Natl Acad Sci U S A 111:E2056-65 PMC4024881 pubmed |
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Sridharan D, Schwarz JS, Knudsen EI (2014) Selective attention in birds. Curr Biol 24:R510-3 pubmed |
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Sridharan D, Steinmetz NA, Moore T, Knudsen EI (2014) Distinguishing bias from sensitivity effects in multialternative detection tasks. J Vis 14: PMC4141865 pubmed |
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Sridharan D, Knudsen EI (2014) Gamma oscillations in the midbrain spatial attention network: linking circuits to function. Curr Opin Neurobiol 31C:189-198 pubmed |
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Sridharan D, Knudsen EI (2014) Selective disinhibition: A unified neural mechanism for predictive and post hoc attentional selection. Vision Res : pubmed |
Keuroghlian, Alex (2006 - 2008) |
Knudsen |
Keuroghlian AS, Knudsen EI (2007) Adaptive auditory plasticity in developing and adult animals. Prog Neurobiol 82:109-21 pubmed |
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Sephton SE, Dhabhar FS, Keuroghlian AS, Giese-Davis J, McEwen BS, Ionan AC, Spiegel D (2009) Depression, cortisol, and suppressed cell-mediated immunity in metastatic breast cancer. Brain Behav Immun 23:1148-55 pubmed |
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Keuroghlian AS, Butler LD, Neri E, Spiegel D (2010) Hypnotizability, posttraumatic stress, and depressive symptoms in metastatic breast cancer. Int J Clin Exp Hypn 58:39-52 PMC3655698 pubmed |
Bryant, Astra Shamgar (2009 - 2014) |
Knudsen & Huguenard |
Bryant AS, Li B, Beenhakker MP, Huguenard JR (2009) Maintenance of thalamic epileptiform activity depends on the astrocytic glutamate-glutamine cycle. J Neurophysiol 102:2880-8 PMC2777838pubmed |
|
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Paz JT, Bryant AS, Peng K, Fenno L, Yizhar O, Frankel WN, Deisseroth K, Huguenard JR (2011) A new mode of corticothalamic transmission revealed in the Gria4(-/-) model of absence epilepsy. Nat Neurosci 14:1167-73 PMC3308017 pubmed |
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Lacey CJ, Bryant A, Brill J, Huguenard JR (2012) Enhanced NMDA receptor-dependent thalamic excitation and network oscillations in stargazer mice. J Neurosci 32:11067-81 PMC3430525 pubmed |
|
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Goddard CA, Mysore SP, Bryant AS, Huguenard JR, Knudsen EI (2014) Spatially Reciprocal Inhibition of Inhibition within a Stimulus Selection Network in the Avian Midbrain. PLoS One 9:e85865 PMC3897538 pubmed |
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Bryant AS, Goddard CA, Huguenard JR, Knudsen EI (2015) Cholinergic control of gamma power in the midbrain spatial attention network. J Neurosci 35:761-75 PMC4293421 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Jerde, Thomas Edward (2004 - 2009) |
Knutson |
Kirschen MP, Davis-Ratner MS, Jerde TE, Schraedley-Desmond P, Desmond JE (2006) Enhancement of phonological memory following transcranial magnetic stimulation (TMS). Behav Neurol 17:187-94 PMID:17148839 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Komiyama, Takaki (2001 - 2006) |
Luo |
Marin EC, Jefferis GS, Komiyama T, Zhu H, Luo L (2002) Representation of the glomerular olfactory map in the Drosophila brain. Cell 109:243-55 PMID:12007410 pubmed |
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Komiyama T, Johnson WA, Luo L, Jefferis GS (2003) From lineage to wiring specificity. POU domain transcription factors control precise connections of Drosophila olfactory projection neurons. Cell 112:157-67 PMID:12553905 pubmed |
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Jefferis GS, Komiyama T, Luo L (2004) Neuroscience. Calcium and CREST for healthy dendrites. Science 303:179-81 PMID:14715999 pubmed |
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Komiyama T, Carlson JR, Luo L (2004) Olfactory receptor neuron axon targeting: intrinsic transcriptional control and hierarchical interactions. Nat Neurosci 7:819-25 PMID:15247920 pubmed |
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Jefferis GS, Marin EC, Komiyama T, Zhu H, Chihara T, Berdnik D, Luo L (2005) Development of wiring specificity of the Drosophila olfactory system. Chem Senses 30 Suppl 1:i94 PMID:15738213pubmed |
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Komiyama T, Luo L (2006) Development of wiring specificity in the olfactory system. Curr Opin Neurobiol 16:67-73 PMID:16377177 pubmed |
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Sweeney LB, Couto A, Chou YH, Berdnik D, Dickson BJ, Luo L, Komiyama T (2007) Temporal target restriction of olfactory receptor neurons by Semaphorin-1a/PlexinA-mediated axon-axon interactions. Neuron 53:185-200 pubmed |
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Komiyama T, Sweeney LB, Schuldiner O, Garcia KC, Luo L (2007) Graded expression of semaphorin-1a cell-autonomously directs dendritic targeting of olfactory projection neurons. Cell 128:399-410 pubmed |
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Komiyama T, Luo L (2007) Intrinsic control of precise dendritic targeting by an ensemble of transcription factors. Curr Biol 17:278-85 pubmed |
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Spletter ML, Liu J, Liu J, Su H, Giniger E, Komiyama T, Quake S, Luo L (2007) Lola regulates Drosophila olfactory projection neuron identity and targeting specificity. Neural Dev 2:14 PMC1947980pubmed |
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Sweeney LB, Chou YH, Wu Z, Joo W, Komiyama T, Potter CJ, Kolodkin AL, Garcia KC, Luo L (2011) Secreted semaphorins from degenerating larval ORN axons direct adult projection neuron dendrite targeting. Neuron 72:734-47 PMC3365565 pubmed |
Thomason, Moriah (2001 - 2006) |
Gabrieli |
Bunge SA, Dudukovic NM, Thomason ME, Vaidya CJ, Gabrieli JD (2002) Immature frontal lobe contributions to cognitive control in children: evidence from fMRI. Neuron 33:301-11 PMID:11804576pubmed |
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Preston AR, Thomason ME, Ochsner KN, Cooper JC, Glover GH (2004) Comparison of spiral-in/out and spiral-out BOLD fMRI at 1.5 and 3 T. Neuroimage 21:291-301 PMID:14741667 pubmed |
|
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Glover GH, Thomason ME (2004) Improved combination of spiral-in/out images for BOLD fMRI. Magn Reson Med 51:863-8 PMID:15065263 pubmed |
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Thomason ME, Burrows BE, Gabrieli JD, Glover GH (2005) Breath holding reveals differences in fMRI BOLD signal in children and adults. Neuroimage 25:824-37 PMID:15808983 pubmed |
|
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Thomason ME, Foland LC, Glover GH (2007) Calibration of BOLD fMRI using breath holding reduces group variance during a cognitive task. Hum Brain Mapp 28:59-68 pubmed |
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Thomason ME, Glover GH (2008) Controlled inspiration depth reduces variance in breath-holding-induced BOLD signal. Neuroimage 39:206-14 PMC2151095 pubmed |
|
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Thomason ME, Chang CE, Glover GH, Gabrieli JD, Greicius MD, Gotlib IH (2008) Default-mode function and task-induced deactivation have overlapping brain substrates in children. Neuroimage 41:1493-503 PMC2735193 pubmed |
|
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Chang C, Thomason ME, Glover GH (2008) Mapping and correction of vascular hemodynamic latency in the BOLD signal. Neuroimage 43:90-102 PMC2587338 pubmed |
|
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Thomason ME, Race E, Burrows B, Whitfield-Gabrieli S, Glover GH, Gabrieli JD (2009) Development of spatial and verbal working memory capacity in the human brain. J Cogn Neurosci 21:316-32 PMC2746557 pubmed |
|
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Thomason ME, Hamilton JP, Gotlib IH (2011) Stress-induced activation of the HPA axis predicts connectivity between subgenual cingulate and salience network during rest in adolescents. J Child Psychol Psychiatry 52:1026-34 PMC3169772 pubmed |
|
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Chen G, Glen DR, Saad ZS, Paul Hamilton J, Thomason ME, Gotlib IH, Cox RW (2011) Vector autoregression, structural equation modeling, and their synthesis in neuroimaging data analysis. Comput Biol Med 41:1142-55 PMC3223325 pubmed |
|
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Marusak HA, Martin KR, Etkin A, Thomason ME (2014) Childhood Trauma Exposure Disrupts the Automatic Regulation of Emotional Processing. Neuropsychopharmacology : pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Knowles, Juliet (2004 - 2008) |
Longo |
Longo FM, Yang T, Knowles JK, Xie Y, Moore LA, Massa SM (2007) Small molecule neurotrophin receptor ligands: novel strategies for targeting Alzheimer's disease mechanisms. Curr Alzheimer Res 4:503-6 pubmed |
|
|
Yang T, Knowles JK, Lu Q, Zhang H, Arancio O, Moore LA, Chang T, Wang Q, Andreasson K, Rajadas J, Fuller GG, Xie Y, Massa SM, Longo FM (2008) Small molecule, non-peptide p75 ligands inhibit Abeta-induced neurodegeneration and synaptic impairment. PLoS One 3:e3604 PMC2575383 pubmed |
|
|
Knowles JK, Rajadas J, Nguyen TV, Yang T, LeMieux MC, Vander Griend L, Ishikawa C, Massa SM, Wyss-Coray T, Longo FM (2009) The p75 neurotrophin receptor promotes amyloid-beta(1-42)-induced neuritic dystrophy in vitro and in vivo. J Neurosci 29:10627-37 PMC2771439 pubmed |
|
|
Simmons DA, Knowles JK, Belichenko NP, Banerjee G, Finkle C, Massa SM, Longo FM (2014) A small molecule p75NTR ligand, LM11A-31, reverses cholinergic neurite dystrophy in Alzheimer's disease mouse models with mid- to late-stage disease progression. PLoS One 9:e102136 PMC4143160 pubmed |
|
|
|
Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Hoopfer, Eric (2001 - 2007) |
Luo |
Watts RJ, Hoopfer ED, Luo L (2003) Axon pruning during Drosophila metamorphosis: evidence for local degeneration and requirement of the ubiquitin-proteasome system. Neuron 38:871-85 PMID:12818174 pubmed |
|
|
Zhai Q, Wang J, Kim A, Liu Q, Watts R, Hoopfer E, Mitchison T, Luo L, He Z (2003) Involvement of the ubiquitin-proteasome system in the early stages of wallerian degeneration. Neuron 39:217-25 PMID:12873380 pubmed |
|
|
Hoopfer ED, McLaughlin T, Watts RJ, Schuldiner O, O'Leary DD, Luo L (2006) Wlds protection distinguishes axon degeneration following injury from naturally occurring developmental pruning. Neuron 50:883-95 PMID:16772170 pubmed |
|
|
Hoopfer ED, Penton A, Watts RJ, Luo L (2008) Genomic analysis of Drosophila neuronal remodeling: a role for the RNA-binding protein Boule as a negative regulator of axon pruning. J Neurosci 28:6092-103 PMC2713105 pubmed |
|
|
Inagaki HK, Jung Y, Hoopfer ED, Wong AM, Mishra N, Lin JY, Tsien RY, Anderson DJ (2014) Optogenetic control of Drosophila using a red-shifted channelrhodopsin reveals experience-dependent influences on courtship. Nat Methods 11:325-32 PMC4151318 pubmed |
Komiyama, Takaki (2001 - 2006) |
Luo |
Marin EC, Jefferis GS, Komiyama T, Zhu H, Luo L (2002) Representation of the glomerular olfactory map in the Drosophila brain. Cell 109:243-55 PMID:12007410 pubmed |
|
|
Komiyama T, Johnson WA, Luo L, Jefferis GS (2003) From lineage to wiring specificity. POU domain transcription factors control precise connections of Drosophila olfactory projection neurons. Cell 112:157-67 PMID:12553905 pubmed |
|
|
Jefferis GS, Komiyama T, Luo L (2004) Neuroscience. Calcium and CREST for healthy dendrites. Science 303:179-81 PMID:14715999 pubmed |
|
|
Komiyama T, Carlson JR, Luo L (2004) Olfactory receptor neuron axon targeting: intrinsic transcriptional control and hierarchical interactions. Nat Neurosci 7:819-25 PMID:15247920 pubmed |
|
|
Jefferis GS, Marin EC, Komiyama T, Zhu H, Chihara T, Berdnik D, Luo L (2005) Development of wiring specificity of the Drosophila olfactory system. Chem Senses 30 Suppl 1:i94 PMID:15738213pubmed |
|
|
Komiyama T, Luo L (2006) Development of wiring specificity in the olfactory system. Curr Opin Neurobiol 16:67-73 PMID:16377177 pubmed |
|
|
Sweeney LB, Couto A, Chou YH, Berdnik D, Dickson BJ, Luo L, Komiyama T (2007) Temporal target restriction of olfactory receptor neurons by Semaphorin-1a/PlexinA-mediated axon-axon interactions. Neuron 53:185-200 pubmed |
|
|
Komiyama T, Sweeney LB, Schuldiner O, Garcia KC, Luo L (2007) Graded expression of semaphorin-1a cell-autonomously directs dendritic targeting of olfactory projection neurons. Cell 128:399-410 pubmed |
|
|
Komiyama T, Luo L (2007) Intrinsic control of precise dendritic targeting by an ensemble of transcription factors. Curr Biol 17:278-85 pubmed |
|
|
Spletter ML, Liu J, Liu J, Su H, Giniger E, Komiyama T, Quake S, Luo L (2007) Lola regulates Drosophila olfactory projection neuron identity and targeting specificity. Neural Dev 2:14 PMC1947980pubmed |
|
|
Sweeney LB, Chou YH, Wu Z, Joo W, Komiyama T, Potter CJ, Kolodkin AL, Garcia KC, Luo L (2011) Secreted semaphorins from degenerating larval ORN axons direct adult projection neuron dendrite targeting. Neuron 72:734-47 PMC3365565 pubmed |
Espinosa, Juan Sebastian (2002 - 2009) |
Luo |
Goldberg JL, Espinosa JS, Xu Y, Davidson N, Kovacs GT, Barres BA (2002) Retinal ganglion cells do not extend axons by default: promotion by neurotrophic signaling and electrical activity. Neuron 33:689-702 PMID:11879647 pubmed |
|
|
Zong H, Espinosa JS, Su HH, Muzumdar MD, Luo L (2005) Mosaic analysis with double markers in mice. Cell 121:479-92 PMID:15882628 pubmed |
|
|
Espinosa JS, Luo L (2008) Timing neurogenesis and differentiation: insights from quantitative clonal analyses of cerebellar granule cells. J Neurosci 28:2301-12 PMC2586640 pubmed |
|
|
Espinosa JS, Wheeler DG, Tsien RW, Luo L (2009) Uncoupling dendrite growth and patterning: single-cell knockout analysis of NMDA receptor 2B. Neuron 62:205-17 PMC2788338 pubmed |
|
|
Espinosa JS, Tea JS, Luo L (2014) Mosaic Analysis with Double Markers (MADM) in Mice. Cold Spring Harb Protoc 2014: pubmed |
Sweeney, Lora Beatrice (2004 - 2010) |
Luo |
Brunet A, Sweeney LB, Sturgill JF, Chua KF, Greer PL, Lin Y, Tran H, Ross SE, Mostoslavsky R, Cohen HY, Hu LS, Cheng HL, Jedrychowski MP, Gygi SP, Sinclair DA, Alt FW, Greenberg ME (2004) Stress-dependent regulation of FOXO transcription factors by the SIRT1 deacetylase. Science 303:2011-5 PMID:14976264 pubmed |
|
|
Sweeney LB, Couto A, Chou YH, Berdnik D, Dickson BJ, Luo L, Komiyama T (2007) Temporal target restriction of olfactory receptor neurons by Semaphorin-1a/PlexinA-mediated axon-axon interactions. Neuron 53:185-200 pubmed |
|
|
Komiyama T, Sweeney LB, Schuldiner O, Garcia KC, Luo L (2007) Graded expression of semaphorin-1a cell-autonomously directs dendritic targeting of olfactory projection neurons. Cell 128:399-410 pubmed |
|
|
Sweeney LB, Luo L (2010) 'Fore brain: a hint of the ancestral cortex. Cell 142:679-81 N/A Not a peer reviewed paper. pubmed |
|
|
Wu Z, Sweeney LB, Ayoob JC, Chak K, Andreone BJ, Ohyama T, Kerr R, Luo L, Zlatic M, Kolodkin AL (2011) A combinatorial semaphorin code instructs the initial steps of sensory circuit assembly in the Drosophila CNS. Neuron 70:281-98 PMC3095019 pubmed |
|
|
Sweeney LB, Chou YH, Wu Z, Joo W, Komiyama T, Potter CJ, Kolodkin AL, Garcia KC, Luo L (2011) Secreted semaphorins from degenerating larval ORN axons direct adult projection neuron dendrite targeting. Neuron 72:734-47 PMC3365565 pubmed |
|
|
Joo WJ, Sweeney LB, Liang L, Luo L (2013) Linking cell fate, trajectory choice, and target selection: genetic analysis of Sema-2b in olfactory axon targeting. Neuron 78:673-86 PMC3727417 pubmed |
Yang, Yufeng (2004 - 2009) |
Lu |
Yang Y, Gehrke S, Haque ME, Imai Y, Kosek J, Yang L, Beal MF, Nishimura I, Wakamatsu K, Ito S, Takahashi R, Lu B (2005) Inactivation of Drosophila DJ-1 leads to impairments of oxidative stress response and phosphatidylinositol 3-kinase/Akt signaling. Proc Natl Acad Sci U S A 102:13670-5 PMC1224636 pubmed |
|
|
Kumar SS, Wen X, Yang Y, Buckmaster PS (2006) GABAA receptor-mediated IPSCs and alpha1 subunit expression are not reduced in the substantia nigra pars reticulata of gerbils with inherited epilepsy. J Neurophysiol 95:2446-55 PMID:16407426 pubmed |
|
|
Yang Y, Ouyang Y, Yang L, Beal MF, McQuibban A, Vogel H, Lu B (2008) Pink1 regulates mitochondrial dynamics through interaction with the fission/fusion machinery. Proc Natl Acad Sci U S A 105:7070-5 PMC2383971 pubmed |
|
|
Yang Y, Lu B (2009) Mitochondrial morphogenesis, distribution, and Parkinson disease: insights from PINK1. J Neuropathol Exp Neurol 68:953-63 PMC3045809 pubmed |
|
|
Faust K, Gehrke S, Yang Y, Yang L, Beal MF, Lu B (2009) Neuroprotective effects of compounds with antioxidant and anti-inflammatory properties in a Drosophila model of Parkinson's disease. BMC Neurosci 10:109 PMC3152779 pubmed |
|
|
Yan X, Sasi SP, Gee H, Lee J, Yang Y, Mehrzad R, Onufrak J, Song J, Enderling H, Agarwal A, Rahimi L, Morgan J, Wilson PF, Carrozza J, Walsh K, Kishore R, Goukassian DA (2014) Cardiovascular Risks Associated with Low Dose Ionizing Particle Radiation. PLoS One 9:e110269 PMC4206415 pubmed |
Tea, Joy Singyi (néeWu) (2005 - 2010) |
Luo |
Wu JS, Luo L (2006) A protocol for mosaic analysis with a repressible cell marker (MARCM) in Drosophila. Nat Protoc 1:2583-9 PMID:17406512 pubmed |
|
|
Wu JS, Luo L (2006) A protocol for dissecting Drosophila melanogaster brains for live imaging or immunostaining. Nat Protoc 1:2110-5 PMID:17487202 pubmed |
|
|
Schuldiner O, Berdnik D, Levy JM, Wu JS, Luginbuhl D, Gontang AC, Luo L (2008) piggyBac-based mosaic screen identifies a postmitotic function for cohesin in regulating developmental axon pruning. Dev Cell 14:227-38 PMC2268086 pubmed |
|
|
Tea JS, Chihara T, Luo L (2010) Histone deacetylase Rpd3 regulates olfactory projection neuron dendrite targeting via the transcription factor Prospero. J Neurosci 30:9939-46 PMC2924735 pubmed |
|
|
Tea JS, Luo L (2011) The chromatin remodeling factor Bap55 functions through the TIP60 complex to regulate olfactory projection neuron dendrite targeting. Neural Dev 6:5 PMC3038883 pubmed |
|
|
Espinosa JS, Tea JS, Luo L (2014) Mosaic Analysis with Double Markers (MADM) in Mice. Cold Spring Harb Protoc 2014: pubmed |
Guenthner,Casey Jack (2009 - 2015) |
Luo |
Guenthner CJ, Miyamichi K, Yang HH, Heller HC, Luo L (2013) Permanent genetic access to transiently active neurons via TRAP: targeted recombination in active populations. Neuron 78:773-84 PMC3782391 pubmed |
Joo, William Jinsoo (2009 - 2014) |
Luo |
Sweeney LB, Chou YH, Wu Z, Joo W, Komiyama T, Potter CJ, Kolodkin AL, Garcia KC, Luo L (2011) Secreted semaphorins from degenerating larval ORN axons direct adult projection neuron dendrite targeting. Neuron 72:734-47 PMC3365565 pubmed |
|
|
Tasic B, Miyamichi K, Hippenmeyer S, Dani VS, Zeng H, Joo W, Zong H, Chen-Tsai Y, Luo L (2012) Extensions of MADM (Mosaic Analysis with Double Markers) in Mice. PLoS One 7:e33332 PMC3314016 pubmed |
|
|
Joo WJ, Sweeney LB, Liang L, Luo L (2013) Linking cell fate, trajectory choice, and target selection: genetic analysis of Sema-2b in olfactory axon targeting. Neuron 78:673-86 PMC3727417 pubmed |
|
|
Shiau CE, Monk KR, Joo W, Talbot WS (2013) An Anti-inflammatory NOD-like Receptor Is Required for Microglia Development. Cell Rep 5:1342-52 PMC3878655 pubmed |
|
|
|
Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Hoopfer, Eric (2001 - 2007) |
Luo |
Watts RJ, Hoopfer ED, Luo L (2003) Axon pruning during Drosophila metamorphosis: evidence for local degeneration and requirement of the ubiquitin-proteasome system. Neuron 38:871-85 PMID:12818174 pubmed |
|
|
Zhai Q, Wang J, Kim A, Liu Q, Watts R, Hoopfer E, Mitchison T, Luo L, He Z (2003) Involvement of the ubiquitin-proteasome system in the early stages of wallerian degeneration. Neuron 39:217-25 PMID:12873380 pubmed |
|
|
Hoopfer ED, McLaughlin T, Watts RJ, Schuldiner O, O'Leary DD, Luo L (2006) Wlds protection distinguishes axon degeneration following injury from naturally occurring developmental pruning. Neuron 50:883-95 PMID:16772170 pubmed |
|
|
Hoopfer ED, Penton A, Watts RJ, Luo L (2008) Genomic analysis of Drosophila neuronal remodeling: a role for the RNA-binding protein Boule as a negative regulator of axon pruning. J Neurosci 28:6092-103 PMC2713105 pubmed |
|
|
Inagaki HK, Jung Y, Hoopfer ED, Wong AM, Mishra N, Lin JY, Tsien RY, Anderson DJ (2014) Optogenetic control of Drosophila using a red-shifted channelrhodopsin reveals experience-dependent influences on courtship. Nat Methods 11:325-32 PMC4151318 pubmed |
Komiyama, Takaki (2001 - 2006) |
Luo |
Marin EC, Jefferis GS, Komiyama T, Zhu H, Luo L (2002) Representation of the glomerular olfactory map in the Drosophila brain. Cell 109:243-55 PMID:12007410 pubmed |
|
|
Komiyama T, Johnson WA, Luo L, Jefferis GS (2003) From lineage to wiring specificity. POU domain transcription factors control precise connections of Drosophila olfactory projection neurons. Cell 112:157-67 PMID:12553905 pubmed |
|
|
Jefferis GS, Komiyama T, Luo L (2004) Neuroscience. Calcium and CREST for healthy dendrites. Science 303:179-81 PMID:14715999 pubmed |
|
|
Komiyama T, Carlson JR, Luo L (2004) Olfactory receptor neuron axon targeting: intrinsic transcriptional control and hierarchical interactions. Nat Neurosci 7:819-25 PMID:15247920 pubmed |
|
|
Jefferis GS, Marin EC, Komiyama T, Zhu H, Chihara T, Berdnik D, Luo L (2005) Development of wiring specificity of the Drosophila olfactory system. Chem Senses 30 Suppl 1:i94 PMID:15738213pubmed |
|
|
Komiyama T, Luo L (2006) Development of wiring specificity in the olfactory system. Curr Opin Neurobiol 16:67-73 PMID:16377177 pubmed |
|
|
Sweeney LB, Couto A, Chou YH, Berdnik D, Dickson BJ, Luo L, Komiyama T (2007) Temporal target restriction of olfactory receptor neurons by Semaphorin-1a/PlexinA-mediated axon-axon interactions. Neuron 53:185-200 pubmed |
|
|
Komiyama T, Sweeney LB, Schuldiner O, Garcia KC, Luo L (2007) Graded expression of semaphorin-1a cell-autonomously directs dendritic targeting of olfactory projection neurons. Cell 128:399-410 pubmed |
|
|
Komiyama T, Luo L (2007) Intrinsic control of precise dendritic targeting by an ensemble of transcription factors. Curr Biol 17:278-85 pubmed |
|
|
Spletter ML, Liu J, Liu J, Su H, Giniger E, Komiyama T, Quake S, Luo L (2007) Lola regulates Drosophila olfactory projection neuron identity and targeting specificity. Neural Dev 2:14 PMC1947980pubmed |
|
|
Sweeney LB, Chou YH, Wu Z, Joo W, Komiyama T, Potter CJ, Kolodkin AL, Garcia KC, Luo L (2011) Secreted semaphorins from degenerating larval ORN axons direct adult projection neuron dendrite targeting. Neuron 72:734-47 PMC3365565 pubmed |
Espinosa, Juan Sebastian (2002 - 2009) |
Luo |
Goldberg JL, Espinosa JS, Xu Y, Davidson N, Kovacs GT, Barres BA (2002) Retinal ganglion cells do not extend axons by default: promotion by neurotrophic signaling and electrical activity. Neuron 33:689-702 PMID:11879647 pubmed |
|
|
Zong H, Espinosa JS, Su HH, Muzumdar MD, Luo L (2005) Mosaic analysis with double markers in mice. Cell 121:479-92 PMID:15882628 pubmed |
|
|
Espinosa JS, Luo L (2008) Timing neurogenesis and differentiation: insights from quantitative clonal analyses of cerebellar granule cells. J Neurosci 28:2301-12 PMC2586640 pubmed |
|
|
Espinosa JS, Wheeler DG, Tsien RW, Luo L (2009) Uncoupling dendrite growth and patterning: single-cell knockout analysis of NMDA receptor 2B. Neuron 62:205-17 PMC2788338 pubmed |
|
|
Espinosa JS, Tea JS, Luo L (2014) Mosaic Analysis with Double Markers (MADM) in Mice. Cold Spring Harb Protoc 2014: pubmed |
Sweeney, Lora Beatrice (2004 - 2010) |
Luo |
Brunet A, Sweeney LB, Sturgill JF, Chua KF, Greer PL, Lin Y, Tran H, Ross SE, Mostoslavsky R, Cohen HY, Hu LS, Cheng HL, Jedrychowski MP, Gygi SP, Sinclair DA, Alt FW, Greenberg ME (2004) Stress-dependent regulation of FOXO transcription factors by the SIRT1 deacetylase. Science 303:2011-5 PMID:14976264 pubmed |
|
|
Sweeney LB, Couto A, Chou YH, Berdnik D, Dickson BJ, Luo L, Komiyama T (2007) Temporal target restriction of olfactory receptor neurons by Semaphorin-1a/PlexinA-mediated axon-axon interactions. Neuron 53:185-200 pubmed |
|
|
Komiyama T, Sweeney LB, Schuldiner O, Garcia KC, Luo L (2007) Graded expression of semaphorin-1a cell-autonomously directs dendritic targeting of olfactory projection neurons. Cell 128:399-410 pubmed |
|
|
Sweeney LB, Luo L (2010) 'Fore brain: a hint of the ancestral cortex. Cell 142:679-81 N/A Not a peer reviewed paper. pubmed |
|
|
Wu Z, Sweeney LB, Ayoob JC, Chak K, Andreone BJ, Ohyama T, Kerr R, Luo L, Zlatic M, Kolodkin AL (2011) A combinatorial semaphorin code instructs the initial steps of sensory circuit assembly in the Drosophila CNS. Neuron 70:281-98 PMC3095019 pubmed |
|
|
Sweeney LB, Chou YH, Wu Z, Joo W, Komiyama T, Potter CJ, Kolodkin AL, Garcia KC, Luo L (2011) Secreted semaphorins from degenerating larval ORN axons direct adult projection neuron dendrite targeting. Neuron 72:734-47 PMC3365565 pubmed |
|
|
Joo WJ, Sweeney LB, Liang L, Luo L (2013) Linking cell fate, trajectory choice, and target selection: genetic analysis of Sema-2b in olfactory axon targeting. Neuron 78:673-86 PMC3727417 pubmed |
Tea, Joy Singyi (néeWu) (2005 - 2010) |
Luo |
Wu JS, Luo L (2006) A protocol for mosaic analysis with a repressible cell marker (MARCM) in Drosophila. Nat Protoc 1:2583-9 PMID:17406512 pubmed |
|
|
Wu JS, Luo L (2006) A protocol for dissecting Drosophila melanogaster brains for live imaging or immunostaining. Nat Protoc 1:2110-5 PMID:17487202 pubmed |
|
|
Schuldiner O, Berdnik D, Levy JM, Wu JS, Luginbuhl D, Gontang AC, Luo L (2008) piggyBac-based mosaic screen identifies a postmitotic function for cohesin in regulating developmental axon pruning. Dev Cell 14:227-38 PMC2268086 pubmed |
|
|
Tea JS, Chihara T, Luo L (2010) Histone deacetylase Rpd3 regulates olfactory projection neuron dendrite targeting via the transcription factor Prospero. J Neurosci 30:9939-46 PMC2924735 pubmed |
|
|
Tea JS, Luo L (2011) The chromatin remodeling factor Bap55 functions through the TIP60 complex to regulate olfactory projection neuron dendrite targeting. Neural Dev 6:5 PMC3038883 pubmed |
|
|
Espinosa JS, Tea JS, Luo L (2014) Mosaic Analysis with Double Markers (MADM) in Mice. Cold Spring Harb Protoc 2014: pubmed |
Guenthner,Casey Jack (2009 - 2015) |
Luo |
Guenthner CJ, Miyamichi K, Yang HH, Heller HC, Luo L (2013) Permanent genetic access to transiently active neurons via TRAP: targeted recombination in active populations. Neuron 78:773-84 PMC3782391 pubmed |
Joo, William Jinsoo (2009 - 2014) |
Luo |
Sweeney LB, Chou YH, Wu Z, Joo W, Komiyama T, Potter CJ, Kolodkin AL, Garcia KC, Luo L (2011) Secreted semaphorins from degenerating larval ORN axons direct adult projection neuron dendrite targeting. Neuron 72:734-47 PMC3365565 pubmed |
|
|
Tasic B, Miyamichi K, Hippenmeyer S, Dani VS, Zeng H, Joo W, Zong H, Chen-Tsai Y, Luo L (2012) Extensions of MADM (Mosaic Analysis with Double Markers) in Mice. PLoS One 7:e33332 PMC3314016 pubmed |
|
|
Joo WJ, Sweeney LB, Liang L, Luo L (2013) Linking cell fate, trajectory choice, and target selection: genetic analysis of Sema-2b in olfactory axon targeting. Neuron 78:673-86 PMC3727417 pubmed |
|
|
Shiau CE, Monk KR, Joo W, Talbot WS (2013) An Anti-inflammatory NOD-like Receptor Is Required for Microglia Development. Cell Rep 5:1342-52 PMC3878655 pubmed |
|
|
|
Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Nechvatal, Jordan Michael (2007 - 2013) |
Lyons |
Nechvatal JM, Lyons DM (2013) Coping changes the brain. Front Behav Neurosci 7:13 PMC3579178 pubmed |
|
|
|
Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Brown, Justin Emmanuel (2005 - 2011) |
Mackey |
Brown JE, Chatterjee N, Younger J, Mackey S (2011) Towards a physiology-based measure of pain: patterns of human brain activity distinguish painful from non-painful thermal stimulation. PLoS One 6:e24124 PMC3172232 pubmed |
|
|
Ung H, Brown JE, Johnson KA, Younger J, Hush J, Mackey S (2012) Multivariate Classification of Structural MRI Data Detects Chronic Low Back Pain. Cereb Cortex : PMC3948494 pubmed |
|
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|
Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Huggins, Matthew Leigh (2003 - 2003) |
Madison |
Emond MR, Montgomery JM, Huggins ML, Hanson JE, Mao L, Huganir RL, Madison DV (2010) AMPA receptor subunits define properties of state-dependent synaptic plasticity. J Physiol 588:1929-46 PMC2901981 pubmed |
|
|
|
Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Tsui, Jennifer Ji-Van (2002 - 2005) |
Malenka |
Ju W, Morishita W, Tsui J, Gaietta G, Deerinck TJ, Adams SR, Garner CC, Tsien RY, Ellisman MH, Malenka RC (2004) Activity-dependent regulation of dendritic synthesis and trafficking of AMPA receptors. Nat Neurosci 7:244-53 PMID:14770185 pubmed |
|
|
Tsui J, Inagaki M, Schulman H (2005) Calcium/calmodulin-dependent protein kinase II (CaMKII) localization acts in concert with substrate targeting to create spatial restriction for phosphorylation. J Biol Chem 280:9210-6 PMID:15582994 pubmed |
|
|
Dong Y, Nasif FJ, Tsui JJ, Ju WY, Cooper DC, Hu XT, Malenka RC, White FJ (2005) Cocaine-induced plasticity of intrinsic membrane properties in prefrontal cortex pyramidal neurons: adaptations in potassium currents. J Neurosci 25:936-40 PMID:15673674 pubmed |
|
|
Tsui J, Malenka RC (2006) Substrate localization creates specificity in calcium/calmodulin-dependent protein kinase II signaling at synapses. J Biol Chem 281:13794-804 PMID:16551613 pubmed |
Singla, Sheela (2003 - 2006) |
Malenka |
Singla SI, Hudmon A, Goldberg JM, Smith JL, Schulman H (2001) Molecular characterization of calmodulin trapping by calcium/calmodulin-dependent protein kinase II. J Biol Chem 276:29353-60 PMID:11384969 pubmed |
|
|
Deisseroth K, Singla S, Toda H, Monje ML, Palmer TD, Malenka RC (2004) Excitation-neurogenesis coupling in adult neural stem/progenitor cells. Neuron 42:535-52 PMID:15157417 pubmed |
|
|
Singla S, Kreitzer AC, Malenka RC (2007) Mechanisms for synapse specificity during striatal long-term depression. J Neurosci 27:5260-4 pubmed |
|
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|
Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Schaevitz, Laura (2002 - 2006) |
McConnell |
Chen B, Schaevitz LR, McConnell SK (2005) Fezl regulates the differentiation and axon targeting of layer 5 subcortical projection neurons in cerebral cortex. Proc Natl Acad Sci U S A 102:17184-9 PMC1282569 pubmed |
Shieh, Jennifer Cynthia (2003 - 2009) |
McConnell |
Hong HM, Yang JJ, Shieh JC, Lin ML, Li ML, Li SY (2010) Novel mutations in the connexin43 (GJA1) and GJA1 pseudogene may contribute to nonsyndromic hearing loss. Hum Genet 127:545-51pubmed |
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Shieh JC, Schaar BT, Srinivasan K, Brodsky FM, McConnell SK (2011) Endocytosis regulates cell soma translocation and the distribution of adhesion proteins in migrating neurons. PLoS One 6:e17802 PMC3062553 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Abe, Namiko (2004 - 2007; M.S.) |
Meyer |
Abe N, Inoue T, Galvez T, Klein L, Meyer T (2008) Dissecting the role of PtdIns(4,5)P2 in endocytosis and recycling of the transferrin receptor. J Cell Sci 121:1488-94 PMC3579524 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Armstrong, Katherine (2003 - 2007) |
Moore |
Armstrong KM, Fitzgerald JK, Moore T (2006) Changes in visual receptive fields with microstimulation of frontal cortex. Neuron 50:791-8 PMID:16731516 pubmed |
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Armstrong KM, Moore T (2007) Rapid enhancement of visual cortical response discriminability by microstimulation of the frontal eye field. Proc Natl Acad Sci U S A 104:9499-504 PMC1890523pubmed |
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Armstrong KM, Chang MH, Moore T (2009) Selection and maintenance of spatial information by frontal eye field neurons. J Neurosci 29:15621-9 PMC3351279 pubmed |
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Churchland MM, Yu BM, Cunningham JP, Sugrue LP, Cohen MR, Corrado GS, Newsome WT, Clark AM, Hosseini P, Scott BB, Bradley DC, Smith MA, Kohn A, Movshon JA, Armstrong KM,Moore T, Chang SW, Snyder LH, Lisberger SG, Priebe NJ, Finn IM, Ferster D, Ryu SI (2010) Stimulus onset quenches neural variability: a widespread cortical phenomenon. Nat Neurosci 13:369-78 PMC2828350 pubmed |
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Clark KL, Armstrong KM, Moore T (2011) Probing neural circuitry and function with electrical microstimulation. Proc Biol Sci 278:1121-30 PMC3049083 pubmed |
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Chang MH, Armstrong KM, Moore T (2012) Dissociation of response variability from firing rate effects in frontal eye field neurons during visual stimulation, working memory, and attention. J Neurosci 32:2204-16 PMC3439504 pubmed |
Clark, Kelsey Lynne (2003 - 2012) |
Moore |
Kaufer D, Ogle WO, Pincus ZS, Clark KL, Nicholas AC, Dinkel KM, Dumas TC, Ferguson D, Lee AL, Winters MA, Sapolsky RM (2004) Restructuring the neuronal stress response with anti-glucocorticoid gene delivery. Nat Neurosci 7:947-53 PMID:15300253 pubmed |
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Prakash S, McLendon HM, Dubreuil CI, Ghose A, Hwa J, Dennehy KA, Tomalty KM, Clark KL, Van Vactor D, Clandinin TR (2009) Complex interactions amongst N-cadherin, DLAR, and Liprin-alpha regulate Drosophila photoreceptor axon targeting. Dev Biol 336:10-9 PMC2783772 pubmed |
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Clark KL, Armstrong KM, Moore T (2011) Probing neural circuitry and function with electrical microstimulation. Proc Biol Sci 278:1121-30 PMC3049083 pubmed |
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Clark KL, Noudoost B, Moore T (2012) Persistent spatial information in the frontal eye field during object-based short-term memory. J Neurosci 32:10907-14 PMC3491065 pubmed |
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Noudoost B, Clark KL, Moore T (2014) A distinct contribution of the frontal eye field to the visual representation of saccadic targets. J Neurosci 34:3687-98 PMC3942584 pubmed |
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Clark KL, Noudoost B, Moore T (2014) Persistent spatial information in the FEF during object-based short-term memory does not contribute to task performance. J Cogn Neurosci 26:1292-9 pubmed |
Schafer, Robert (2003 - 2009) |
Moore |
Cohen MR, Meissner GW, Schafer RJ, Raymond JL (2004) Reversal of motor learning in the vestibulo-ocular reflex in the absence of visual input. Learn Mem 11:559-65 PMC3225865 pubmed |
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Schafer RJ, Moore T (2007) Attention governs action in the primate frontal eye field. Neuron 56:541-51 PMC2129094 pubmed |
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Schafer RJ, Moore T (2011) Selective attention from voluntary control of neurons in prefrontal cortex. Science 332:1568-71 PMC3371378 pubmed |
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Squire RF, Noudoost B, Schafer RJ, Moore T (2013) Prefrontal contributions to visual selective attention. Annu Rev Neurosci 36:451-66 pubmed |
Burrows, Brittany Edna (2004 - 2010) |
Moore |
Thomason ME, Burrows BE, Gabrieli JD, Glover GH (2005) Breath holding reveals differences in fMRI BOLD signal in children and adults. Neuroimage 25:824-37 PMID:15808983 pubmed |
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Thomason ME, Race E, Burrows B, Whitfield-Gabrieli S, Glover GH, Gabrieli JD (2009) Development of spatial and verbal working memory capacity in the human brain. J Cogn Neurosci 21:316-32 PMC2746557 pubmed |
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Burrows BE, Moore T (2009) Influence and limitations of popout in the selection of salient visual stimuli by area V4 neurons. J Neurosci 29:15169-77 PMC2824599 pubmed |
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Burrows BE, Zirnsak M, Akhlaghpour H, Wang M, Moore T (2014) Global selection of saccadic target features by neurons in area v4. J Neurosci 34:6700-6 PMC4012320 pubmed |
Steinmetz, Nicholas Adam (2007 - 2013) |
Boahen & Moore |
Steinmetz NA, Moore T (2010) Changes in the response rate and response variability of area V4 neurons during the preparation of saccadic eye movements. J Neurophysiol 103:1171-8 N/A: Publisher provided directly to PMC instead of a PMCID number pubmed |
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Noudoost B, Chang MH, Steinmetz NA, Moore T (2010) Top-down control of visual attention. Curr Opin Neurobiol 20:183-90 PMC2901796 pubmed |
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Steinmetz NA, Moore T (2012) Lumping and splitting the neural circuitry of visual attention. Neuron 73:410-2 N/A: Commentary article w/ no NIH or other funding pubmed |
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Zirnsak M, Steinmetz NA, Noudoost B, Xu KZ, Moore T (2014) Visual space is compressed in prefrontal cortex before eye movements. Nature 507:504-7 PMC4064801 pubmed |
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Steinmetz NA, Moore T (2014) Eye movement preparation modulates neuronal responses in area V4 when dissociated from attentional demands. Neuron 83:496-506 PMC4130345 pubmed |
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Sridharan D, Steinmetz NA, Moore T, Knudsen EI (2014) Distinguishing bias from sensitivity effects in multialternative detection tasks. J Vis 14: PMC4141865 pubmed |
Squire, Ryan Fox (2008 - ; M.S.) |
Moore |
Squire RF, Noudoost B, Schafer RJ, Moore T (2013) Prefrontal contributions to visual selective attention. Annu Rev Neurosci 36:451-66 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Cohen, Marlene (2001 - 2006) |
Newsome |
Advani R, Fisher GA, Lum BL, Jambalos C, Cho CD, Cohen M, Gollerkeri A, Sikic BI (2003) Phase I and pharmacokinetic study of BMS-188797, a new taxane analog, administered on a weekly schedule in patients with advanced malignancies. Clin Cancer Res 9:5187-94 PMID:14613998 pubmed |
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Cohen MR, Newsome WT (2004) What electrical microstimulation has revealed about the neural basis of cognition. Curr Opin Neurobiol 14:169-77 PMID:15082321 pubmed |
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Cohen MR, Meissner GW, Schafer RJ, Raymond JL (2004) Reversal of motor learning in the vestibulo-ocular reflex in the absence of visual input. Learn Mem 11:559-65 PMC3225865 pubmed |
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Barberini CL, Cohen MR, Wandell BA, Newsome WT (2005) Cone signal interactions in direction-selective neurons in the middle temporal visual area (MT). J Vis 5:603-21 PMID:16231996 pubmed |
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Cohen MR, Newsome WT (2008) Context-dependent changes in functional circuitry in visual area MT. Neuron 60:162-73 PMC2652654 pubmed |
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Cohen MR, Newsome WT (2009) Estimates of the contribution of single neurons to perception depend on timescale and noise correlation. J Neurosci 29:6635-48 PMC2705937 pubmed |
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Churchland MM, Yu BM, Cunningham JP, Sugrue LP, Cohen MR, Corrado GS, Newsome WT, Clark AM, Hosseini P, Scott BB, Bradley DC, Smith MA, Kohn A, Movshon JA, Armstrong KM,Moore T, Chang SW, Snyder LH, Lisberger SG, Priebe NJ, Finn IM, Ferster D, Ryu SI (2010) Stimulus onset quenches neural variability: a widespread cortical phenomenon. Nat Neurosci 13:369-78 PMC2828350 pubmed |
Rorie, Alan (2001 - 2008) |
Newsome |
Rorie AE, Newsome WT (2005) A general mechanism for decision-making in the human brain? Trends Cogn Sci 9:41-3 PMID:15668095 pubmed |
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Feng S, Holmes P, Rorie A, Newsome WT (2009) Can monkeys choose optimally when faced with noisy stimuli and unequal rewards? PLoS Comput Biol 5:e1000284 PMC2631644 pubmed |
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Rorie AE, Gao J, McClelland JL, Newsome WT (2010) Integration of sensory and reward information during perceptual decision-making in lateral intraparietal cortex (LIP) of the macaque monkey. PLoS One 5:e9308 PMC2824817 pubmed |
Kalmar, Rachel Stern (2004 - 2010) |
Shenoy and Newsome |
Shenoy KV, Santhanam G, Ryu SI, Afshar A, Yu BM, Gilja V, Linderman MD, Kalmar RS, Cunningham JP, Kemere CT, Batista AP, Churchland MM, Meng TH (2006) Increasing the performance of cortically-controlled prostheses. Conf Proc IEEE Eng Med Biol Soc Suppl:6652-6 N/A Conference Paper pubmed |
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Rivera-Alvidrez Z, Kalmar RS, Ryu SI, Shenoy KV (2010) Low-dimensional neural features predict muscle EMG signals. Conf Proc IEEE Eng Med Biol Soc 2010:6027-33 pubmed |
Kimmel, Daniel Landay (2005 - 2013) |
Newsome |
Kimmel DL, Moore T (2007) Temporal patterning of saccadic eye movement signals. J Neurosci 27:7619-30 pubmed |
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Kimmel DL, Mammo D, Newsome WT (2012) Tracking the eye non-invasively: simultaneous comparison of the scleral search coil and optical tracking techniques in the macaque monkey. Front Behav Neurosci 6:49 PMC3418577 pubmed |
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Greicius MD, Kimmel DL (2012) Neuroimaging insights into network-based neurodegeneration. Curr Opin Neurol 25:727-34 pubmed |
Schaich Borg, Jana (2006 - 2012) |
de Lecea & Newsome |
Carter ME, Schaich Borg J, de Lecea L (2009) The brain hypocretins and their receptors: mediators of allostatic arousal. Curr Opin Pharmacol 9:39-45 NIHMSID#468294 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Monje, Michelle Leigh (2001 - 2004) |
Palmer |
Monje ML, Chatten-Brown J, Hye SE, Raley-Susman KM (2000) Free radicals are involved in the damage to protein synthesis after anoxia/aglycemia and NMDA exposure. Brain Res 857:172-82 PMID:10700565 pubmed |
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Phillips RG, Monje ML, Giuli LC, Meier TJ, Yenari MA, Kunis D, Sapolsky RM (2001) Gene therapy effectiveness differs for neuronal survival and behavioral performance. Gene Ther 8:579-85 PMID:11320403 pubmed |
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Monje ML, Phillips R, Sapolsky R (2001) Calbindin overexpression buffers hippocampal cultures from the energetic impairments caused by glutamate. Brain Res 911:37-42 PMID:11489442 pubmed |
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Monje ML, Mizumatsu S, Fike JR, Palmer TD (2002) Irradiation induces neural precursor-cell dysfunction. Nat Med 8:955-62 PMID:12161748 pubmed |
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Monje ML, Palmer T (2003) Radiation injury and neurogenesis. Curr Opin Neurol 16:129-34 PMID:12644738 pubmed |
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Mizumatsu S, Monje ML, Morhardt DR, Rola R, Palmer TD, Fike JR (2003) Extreme sensitivity of adult neurogenesis to low doses of X-irradiation. Cancer Res 63:4021-7 PMID:12874001 pubmed |
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Monje ML, Toda H, Palmer TD (2003) Inflammatory blockade restores adult hippocampal neurogenesis. Science 302:1760-5 PMID:14615545 pubmed |
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Deisseroth K, Singla S, Toda H, Monje ML, Palmer TD, Malenka RC (2004) Excitation-neurogenesis coupling in adult neural stem/progenitor cells. Neuron 42:535-52 PMID:15157417 pubmed |
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Monje ML, Ramakrishna NR, Young G, Drappatz J, Doherty LM, Wen PY, Kesari S (2007) Durable response of a radiation-induced, high-grade cerebellar glioma to temozolomide. J Neurooncol 84:179-83 pubmed |
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Monje ML, Vogel H, Masek M, Ligon KL, Fisher PG, Palmer TD (2007) Impaired human hippocampal neurogenesis after treatment for central nervous system malignancies. Ann Neurol 62:515-20pubmed |
Price, Robin (2002 - 2007) |
Palmer |
Carpentier PA, Haditsch U, Braun AE, Cantu AV, Moon HM, Price RO, Anderson MP, Saravanapandian V, Ismail K, Rivera M, Weimann JM, Palmer TD (2013) Stereotypical alterations in cortical patterning are associated with maternal illness-induced placental dysfunction. J Neurosci 33:16874-88 PMC3807021 pubmed |
Cord, Branden John (2004 - 2010) |
Palmer |
Kalani MY, Cheshier SH, Cord BJ, Bababeygy SR, Vogel H, Weissman IL, Palmer TD, Nusse R (2008) Wnt-mediated self-renewal of neural stem/progenitor cells. Proc Natl Acad Sci U S A 105:16970-5 PMC2575225 pubmed |
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Cord BJ, Li J, Works M, McConnell SK, Palmer T, Hynes MA (2010) Characterization of axon guidance cue sensitivity of human embryonic stem cell-derived dopaminergic neurons. Mol Cell Neurosci 45:324-34 N/A This work was funded by grants from the�Michael J Fox Foundation and the California Institute for Regenerative Medicine (CIRM); SKM (RS1-00271-1), TDP (RC1-00134-1), BJC (T1-00001) and grants from the�Tumori Foundation (SKM),Kinetics Foundation,�Blume pubmed |
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Nguyen HN, Byers B, Cord B, Shcheglovitov A, Byrne J, Gujar P, Kee K, Schüle B, Dolmetsch RE, Langston W, Palmer TD, Pera RR (2011) LRRK2 mutant iPSC-derived DA neurons demonstrate increased susceptibility to oxidative stress. Cell Stem Cell 8:267-80 PMC3578553 pubmed |
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Byers B, Cord B, Nguyen HN, Schüle B, Fenno L, Lee PC, Deisseroth K, Langston JW, Pera RR, Palmer TD (2011) SNCA triplication Parkinson's patient's iPSC-derived DA neurons accumulate α-synuclein and are susceptible to oxidative stress. PLoS One 6:e26159 PMC3217921 pubmed |
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Paşca SP, Portmann T, Voineagu I, Yazawa M, Shcheglovitov A, Paşca AM, Cord B, Palmer TD, Chikahisa S, Nishino S, Bernstein JA, Hallmayer J, Geschwind DH, Dolmetsch RE (2011) Using iPSC-derived neurons to uncover cellular phenotypes associated with Timothy syndrome. Nat Med 17:1657-62 PMC3517299 pubmed |
Panagiotakos, Georgia (2007 - 2014) |
Dolmetsch & Palmer |
Osterhout JA, Josten N, Yamada J, Pan F, Wu SW, Nguyen PL, Panagiotakos G, Inoue YU, Egusa SF, Volgyi B, Inoue T, Bloomfield SA, Barres BA, Berson DM, Feldheim DA, Huberman AD (2011) Cadherin-6 mediates axon-target matching in a non-image-forming visual circuit. Neuron 71:632-9 PMC3513360 pubmed |
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Gomez-Ospina N, Panagiotakos G, Portmann T, Pasca SP, Rabah D, Budzillo A, Kinet JP, Dolmetsch RE (2013) A promoter in the coding region of the calcium channel gene CACNA1C generates the transcription factor CCAT. PLoS One 8:e60526 PMC3628902 pubmed |
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Yucel G, Altindag B, Gomez-Ospina N, Rana A, Panagiotakos G, Lara MF, Dolmetsch R, Oro AE (2013) State-dependent signaling by Cav1.2 regulates hair follicle stem cell function. Genes Dev 27:1217-22 PMC3690395 pubmed |
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Portmann T, Yang M, Mao R, Panagiotakos G, Ellegood J, Dolen G, Bader PL, Grueter BA, Goold C, Fisher E, Clifford K, Rengarajan P, Kalikhman D, Loureiro D, Saw NL, Zhengqui Z, Miller MA, Lerch JP, Henkelman RM, Shamloo M, Malenka RC, Crawley JN, Dolmetsch RE (2014) Behavioral abnormalities and circuit defects in the basal ganglia of a mouse model of 16p11.2 deletion syndrome. Cell Rep 7:1077-92 PMC4251471 pubmed |
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Paşca SP, Panagiotakos G, Dolmetsch RE (2014) Generating human neurons in vitro and using them to understand neuropsychiatric disease. Annu Rev Neurosci 37:479-501 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Guo, Cong (2006 - 2010) |
Raymond |
Ke MC, Guo CC, Raymond JL (2009) Elimination of climbing fiber instructive signals during motor learning. Nat Neurosci 12:1171-9 PMC3864777 pubmed |
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Guo CC, Raymond JL (2010) Motor learning reduces eye movement variability through reweighting of sensory inputs. J Neurosci 30:16241-8 PMC3064501 pubmed |
Rinaldi, Jacob Matteo (2007 - 2012) |
Raymond |
Nguyen-Vu TD, Kimpo RR, Rinaldi JM, Kohli A, Zeng H, Deisseroth K, Raymond JL (2013) Cerebellar Purkinje cell activity drives motor learning. Nat Neurosci 16:1734-6 PMC3966616 pubmed |
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Kimpo RR, Rinaldi JM, Kim CK, Payne HL, Raymond JL (2014) Gating of neural error signals during motor learning. Elife 3:e02076 PMC3989583 pubmed |
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Katoh A, Shin SL, Kimpo RR, Rinaldi JM, Raymond JL (2015) Purkinje cell responses during visually and vestibularly driven smooth eye movements in mice. Brain Behav :e00310 PMC4309896pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Salvia, Kimberly Ann (née Zaia) (2005 - 2010) |
Reimer |
Zaia KA, Reimer RJ (2009) Synaptic Vesicle Protein NTT4/XT1 (SLC6A17) Catalyzes Na+-coupled Neutral Amino Acid Transport. J Biol Chem 284:8439-48 PMC2659202 pubmed |
Prolo, Laura Marie (2006 - 2010) |
Reimer |
Prolo LM, Goodman MB (2008) Physiology: Keeping it regular with protons. Nature 452:35-6 PMC: N/A pubmed |
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Prolo LM, Vogel H, Reimer RJ (2009) The lysosomal sialic acid transporter sialin is required for normal CNS myelination. J Neurosci 29:15355-65 PMC2820501 pubmed |
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Morland C, Nordengen K, Larsson M, Prolo LM, Farzampour Z, Reimer RJ, Gundersen V (2013) Vesicular uptake and exocytosis of L-aspartate is independent of sialin. FASEB J 27:1264-74 PMC3574276 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Adleman, Nancy (2002 - 2008) |
Reiss |
Adleman NE, Menon V, Blasey CM, White CD, Warsofsky IS, Glover GH, Reiss AL (2002) A developmental fMRI study of the Stroop color-word task. Neuroimage 16:61-75 PMID:11969318 pubmed |
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Chang K, Steiner H, Dienes K, Adleman N, Ketter T (2003) Bipolar offspring: a window into bipolar disorder evolution. Biol Psychiatry 53:945-51 PMID:12788239 pubmed |
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Chang K, Adleman N, Dienes K, Barnea-Goraly N, Reiss A, Ketter T (2003) Decreased N-acetylaspartate in children with familial bipolar disorder. Biol Psychiatry 53:1059-65 PMID:12788251 pubmed |
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Chang KD, Dienes K, Blasey C, Adleman N, Ketter T, Steiner H (2003) Divalproex monotherapy in the treatment of bipolar offspring with mood and behavioral disorders and at least mild affective symptoms. J Clin Psychiatry 64:936-42 PMID:12927009 pubmed |
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Chang K, Adleman NE, Dienes K, Simeonova DI, Menon V, Reiss A (2004) Anomalous prefrontal-subcortical activation in familial pediatric bipolar disorder: a functional magnetic resonance imaging investigation. Arch Gen Psychiatry 61:781-92 PMID:15289277 pubmed |
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Chang K, Karchemskiy A, Kelley R, Howe M, Garrett A, Adleman N, Reiss A (2009) Effect of divalproex on brain morphometry, chemistry, and function in youth at high-risk for bipolar disorder: a pilot study. J Child Adolesc Psychopharmacol 19:51-9 PMC2709238 pubmed |
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Singh MK, Chang KD, Mazaika P, Garrett A, Adleman N, Kelley R, Howe M, Reiss A (2010) Neural correlates of response inhibition in pediatric bipolar disorder. J Child Adolesc Psychopharmacol 20:15-24 PMC2835388 pubmed |
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Singh M, Spielman D, Adleman N, Alegria D, Howe M, Reiss A, Chang K (2010) Brain glutamatergic characteristics of pediatric offspring of parents with bipolar disorder. Psychiatry Res 182:165-71 PMC2866778 pubmed |
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Karchemskiy A, Garrett A, Howe M, Adleman N, Simeonova DI, Alegria D, Reiss A, Chang K (2011) Amygdalar, hippocampal, and thalamic volumes in youth at high risk for development of bipolar disorder. Psychiatry Res 194:319-25 PMC3225692 pubmed |
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Garrett AS, Reiss AL, Howe ME, Kelley RG, Singh MK, Adleman NE, Karchemskiy A, Chang KD (2012) Abnormal amygdala and prefrontal cortex activation to facial expressions in pediatric bipolar disorder. J Am Acad Child Adolesc Psychiatry 51:821-31 PMC3408885 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Ferguson, Deveroux (2002 - 2008) |
Sapolsky |
Kaufer D, Ogle WO, Pincus ZS, Clark KL, Nicholas AC, Dinkel KM, Dumas TC, Ferguson D, Lee AL, Winters MA, Sapolsky RM (2004) Restructuring the neuronal stress response with anti-glucocorticoid gene delivery. Nat Neurosci 7:947-53 PMID:15300253 pubmed |
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Nicholas A, Munhoz CD, Ferguson D, Campbell L, Sapolsky R (2006) Enhancing cognition after stress with gene therapy. J Neurosci 26:11637-43 PMID:17093085 pubmed |
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Ferguson D, Sapolsky R (2007) Mineralocorticoid receptor overexpression differentially modulates specific phases of spatial and nonspatial memory. J Neurosci 27:8046-52 pubmed |
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Ferguson D, Lin S, Sapolsky R (2008) Viral vector-mediated blockade of the endocrine stress-response modulates non-spatial memory. Neurosci Lett 437:1-4 PMC2492835 pubmed |
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Ferguson D, Sapolsky R (2008) Overexpression of mineralocorticoid and transdominant glucocorticoid receptor blocks the impairing effects of glucocorticoids on memory. Hippocampus 18:1103-11pubmed |
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Mitra R, Ferguson D, Sapolsky RM (2009) SK2 potassium channel overexpression in basolateral amygdala reduces anxiety, stress-induced corticosterone secretion and dendritic arborization. Mol Psychiatry 14:847-55, 827 PMC2763614 pubmed |
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Mitra R, Ferguson D, Sapolsky RM (2009) Mineralocorticoid receptor overexpression in basolateral amygdala reduces corticosterone secretion and anxiety. Biol Psychiatry 66:686-90 pubmed |
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Buchholz KR, Fritz HM, Chen X, Durbin-Johnson B, Rocke DM, Ferguson DJ, Conrad PA, Boothroyd JC (2011) Identification of tissue cyst wall components by transcriptome analysis of in vivo and in vitro Toxoplasma gondii bradyzoites. Eukaryot Cell 10:1637-47 PMC3232729 pubmed |
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Koo JW, Mazei-Robison MS, Chaudhury D, Juarez B, LaPlant Q, Ferguson D, Feng J, Sun H, Scobie KN, Damez-Werno D, Crumiller M, Ohnishi YN, Ohnishi YH, Mouzon E, Dietz DM, Lobo MK, Neve RL, Russo SJ, Han MH, Nestler EJ (2012) BDNF is a negative modulator of morphine action. Science 338:124-8 PMC3547365 pubmed |
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Chaudhury D, Walsh JJ, Friedman AK, Juarez B, Ku SM, Koo JW, Ferguson D, Tsai HC, Pomeranz L, Christoffel DJ, Nectow AR, Ekstrand M, Domingos A, Mazei-Robison MS, Mouzon E, Lobo MK, Neve RL, Friedman JM, Russo SJ, Deisseroth K, Nestler EJ, Han MH (2013) Rapid regulation of depression-related behaviours by control of midbrain dopamine neurons. Nature 493:532-6 PMC3554860 pubmed |
House,Patrick Kendall (2009 - 2014) |
Sapolsky |
House PK, Vyas A, Sapolsky R (2011) Predator cat odors activate sexual arousal pathways in brains of Toxoplasma gondii infected rats. PLoS One 6:e23277 PMC3157360 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Wetmore, Daniel (2003 - 2009) |
Schnitzer |
Wetmore DZ, Mukamel EA, Schnitzer MJ (2008) Lock-and-key mechanisms of cerebellar memory recall based on rebound currents. J Neurophysiol 100:2328-47 PMC2576199 pubmed |
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Wetmore DZ, Garner CC (2010) Emerging pharmacotherapies for neurodevelopmental disorders. J Dev Behav Pediatr 31:564-81 PMC2967570 pubmed |
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Garner CC, Wetmore DZ (2012) Synaptic pathology of Down syndrome. Adv Exp Med Biol 970:451-68 pubmed |
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Colas D, Chuluun B, Warrier D, Blank M, Wetmore D, Buckmaster P, Garner C, Heller HC (2013) Short-term treatment with the GABAA antagonist pentylenetetrazole produces a sustained procognitive benefit in a mouse model of Down's syndrome. Br J Pharmacol : PMC3696321 pubmed |
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Wetmore DZ, Jirenhed DA, Rasmussen A, Johansson F, Schnitzer MJ, Hesslow G (2014) Bidirectional plasticity of purkinje cells matches temporal features of learning. J Neurosci 34:1731-7 PMC3905143 pubmed |
Wagner, Mark Jason (2007 - 2014) |
Schnitzer |
Gong Y, Wagner MJ, Zhong Li J, Schnitzer MJ (2014) Imaging neural spiking in brain tissue using FRET-opsin protein voltage sensors. Nat Commun 5:3674 PMC4247277 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Barakat, Monique Theresa (2004 - 2010) |
Scott |
Barakat MT, O'Hara BF, Cao VH, Larkin JE, Heller HC, Ruby NF (2004) Light pulses do not induce c-fos or per1 in the SCN of hamsters that fail to reentrain to the photocycle. J Biol Rhythms 19:287-97 PMID:15245648 pubmed |
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Ruby NF, Barakat MT, Heller HC (2004) Phenotypic differences in reentrainment behavior and sensitivity to nighttime light pulses in siberian hamsters. J Biol Rhythms 19:530-41 PMID:15523114pubmed |
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Barakat MT, O'Hara BF, Cao VH, Heller HC, Ruby NF (2005) Light induces c-fos and per1 expression in the suprachiasmatic nucleus of arrhythmic hamsters. Am J Physiol Regul Integr Comp Physiol 289:R1381-6 PMID:16002555 pubmed |
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Hairston IS, Little MT, Scanlon MD, Barakat MT, Palmer TD, Sapolsky RM, Heller HC (2005) Sleep restriction suppresses neurogenesis induced by hippocampus-dependent learning. J Neurophysiol 94:4224-33 PMID:16014798 pubmed |
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Corcoran RB, Bachar Raveh T, Barakat MT, Lee EY, Scott MP (2008) Insulin-like growth factor 2 is required for progression to advanced medulloblastoma in patched1 heterozygous mice. Cancer Res 68:8788-95 PMC2597356 pubmed |
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Barakat MT, Scott MP (2009) Tail wags dog: primary cilia and tumorigenesis. Cancer Cell 16:276-7 PMC3437380 pubmed |
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Barakat MT, Humke EW, Scott MP (2010) Learning from Jekyll to control Hyde: Hedgehog signaling in development and cancer. Trends Mol Med 16:337-48 PMC3651907 pubmed |
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Barakat MT, Humke EW, Scott MP (2013) Kif3a is necessary for initiation and maintenance of medulloblastoma. Carcinogenesis : PMC3670253 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Adelson, Jaimie Dolgin (2008 - 2013) |
Shatz |
Adelson JD, Barreto GE, Xu L, Kim T, Brott BK, Ouyang YB, Naserke T, Djurisic M, Xiong X, Shatz CJ, Giffard RG (2012) Neuroprotection from stroke in the absence of MHCI or PirB. Neuron 73:1100-7 PMC3314229 pubmed |
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Lee H, Brott BK, Kirkby LA, Adelson JD, Cheng S, Feller MB, Datwani A, Shatz CJ (2014) Synapse elimination and learning rules co-regulated by MHC class I H2-Db. Nature 509:195-200 PMC4016165 pubmed |
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Adelson JD, Sapp RW, Brott BK, Lee H, Miyamichi K, Luo L, Cheng S, Djurisic M, Shatz CJ (2014) Developmental Sculpting of Intracortical Circuits by MHC Class I H2-Db and H2-Kb. Cereb Cortex :pubmed |
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Bochner DN, Sapp RW, Adelson JD, Zhang S, Lee H, Djurisic M, Syken J, Dan Y, Shatz CJ (2014) Blocking PirB up-regulates spines and functional synapses to unlock visual cortical plasticity and facilitate recovery from amblyopia. Sci Transl Med 6:258ra140 pubmed |
Bochner, David Neal (2008 - 2013) |
Shatz |
Bochner DN, Sapp RW, Adelson JD, Zhang S, Lee H, Djurisic M, Syken J, Dan Y, Shatz CJ (2014) Blocking PirB up-regulates spines and functional synapses to unlock visual cortical plasticity and facilitate recovery from amblyopia. Sci Transl Med 6:258ra140 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Klassen, Matthew (2001 - 2008) |
Shen |
Goldberg JL, Klassen MP, Hua Y, Barres BA (2002) Amacrine-signaled loss of intrinsic axon growth ability by retinal ganglion cells. Science 296:1860-4 PMID:12052959 pubmed |
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Klassen MP, Shen K (2007) Wnt signaling positions neuromuscular connectivity by inhibiting synapse formation in C. elegans. Cell 130:704-16 pubmed |
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Poon VY, Klassen MP, Shen K (2008) UNC-6/netrin and its receptor UNC-5 locally exclude presynaptic components from dendrites. Nature 455:669-73 NIHMSID 464185 pubmed |
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Klassen MP, Shen K (2009) The curious case of a wandering kinase: CaMKII spreads the wealth? Neuron 61:331-2 NIHMSID 464183 pubmed |
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Maro GS, Klassen MP, Shen K (2009) A beta-catenin-dependent Wnt pathway mediates anteroposterior axon guidance in C. elegans motor neurons. PLoS One 4:e4690 PMC2649571 pubmed |
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Klassen MP, Wu YE, Maeder CI, Nakae I, Cueva JG, Lehrman EK, Tada M, Gengyo-Ando K, Wang GJ, Goodman M, Mitani S, Kontani K, Katada T, Shen K (2010) An Arf-like small G protein, ARL-8, promotes the axonal transport of presynaptic cargoes by suppressing vesicle aggregation. Neuron 66:710-23 PMC3168544 pubmed |
Patel, Maulik (2003 - 2009) |
Shen |
Patel MR, Lehrman EK, Poon VY, Crump JG, Zhen M, Bargmann CI, Shen K (2006) Hierarchical assembly of presynaptic components in defined C. elegans synapses. Nat Neurosci 9:1488-98 PMID:17115039 pubmed |
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Patel MR, Shen K (2009) RSY-1 is a local inhibitor of presynaptic assembly in C. elegans. Science 323:1500-3 PMC3087376 pubmed |
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Patel MR, Shen K (2009) Neurite extension: starting at the finish line. Cell 137:207-9 PMC3083850 pubmed |
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Chia PH, Patel MR, Shen K (2012) NAB-1 instructs synapse assembly by linking adhesion molecules and F-actin to active zone proteins. Nat Neurosci 15:234-42 NIHMSID 336323 pubmed |
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Chia PH, Patel MR, Wagner OI, Klopfenstein DR, Shen K (2013) Intramolecular regulation of presynaptic scaffold protein SYD-2/liprin-α Mol Cell Neurosci 56C:76-84 PMC3930023 pubmed |
Chao, Daniel (2004 - 2008) |
Shen |
Ding M, Chao D, Wang G, Shen K (2007) Spatial regulation of an E3 ubiquitin ligase directs selective synapse elimination. Science 317:947-51 pubmed |
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Chao DL, Shen K (2008) Functional dissection of SYG-1 and SYG-2, cell adhesion molecules required for selective synaptogenesis in C. elegans. Mol Cell Neurosci 39:248-57 PMC2575880 pubmed |
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Chao DL, Ma L, Shen K (2009) Transient cell-cell interactions in neural circuit formation. Nat Rev Neurosci 10:262-71 PMC3083859 pubmed |
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Yan J, Chao DL, Toba S, Koyasako K, Yasunaga T, Hirotsune S, Shen K (2013) Kinesin-1 regulates dendrite microtubule polarity in Caenorhabditis elegans. Elife 2:e00133 PMC3591006 pubmed |
Kalmar, Rachel Stern (2004 - 2010) |
Shenoy and Newsome |
Shenoy KV, Santhanam G, Ryu SI, Afshar A, Yu BM, Gilja V, Linderman MD, Kalmar RS, Cunningham JP, Kemere CT, Batista AP, Churchland MM, Meng TH (2006) Increasing the performance of cortically-controlled prostheses. Conf Proc IEEE Eng Med Biol Soc Suppl:6652-6 N/A Conference Paper pubmed |
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Rivera-Alvidrez Z, Kalmar RS, Ryu SI, Shenoy KV (2010) Low-dimensional neural features predict muscle EMG signals. Conf Proc IEEE Eng Med Biol Soc 2010:6027-33 pubmed |
Poon, Vivian (2004 - 2009) |
Shen |
Patel MR, Lehrman EK, Poon VY, Crump JG, Zhen M, Bargmann CI, Shen K (2006) Hierarchical assembly of presynaptic components in defined C. elegans synapses. Nat Neurosci 9:1488-98 PMID:17115039 pubmed |
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Poon VY, Klassen MP, Shen K (2008) UNC-6/netrin and its receptor UNC-5 locally exclude presynaptic components from dendrites. Nature 455:669-73 NIHMSID 464185 pubmed |
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Ou CY, Poon VY, Maeder CI, Watanabe S, Lehrman EK, Fu AK, Park M, Fu WY, Jorgensen EM, Ip NY, Shen K (2010) Two cyclin-dependent kinase pathways are essential for polarized trafficking of presynaptic components. Cell 141:846-58 PMC3168554 pubmed |
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Park M, Watanabe S, Poon VY, Ou CY, Jorgensen EM, Shen K (2011) CYY-1/cyclin Y and CDK-5 differentially regulate synapse elimination and formation for rewiring neural circuits. Neuron 70:742-57 PMC3168547 pubmed |
Kaufman, Matthew Tyler (2005 - 2011) |
Shenoy |
Knutson B, Taylor J, Kaufman M, Peterson R, Glover G (2005) Distributed neural representation of expected value. J Neurosci 25:4806-12 PMID:15888656 pubmed |
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Kaufman MT, Churchland MM, Santhanam G, Yu BM, Afshar A, Ryu SI, Shenoy KV (2010) Roles of monkey premotor neuron classes in movement preparation and execution. J Neurophysiol 104:799-810 PMC2934936 pubmed |
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Churchland MM, Cunningham JP, Kaufman MT, Ryu SI, Shenoy KV (2010) Cortical preparatory activity: representation of movement or first cog in a dynamical machine? Neuron 68:387-400 PMC2991102 pubmed |
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Diester I, Kaufman MT, Mogri M, Pashaie R, Goo W, Yizhar O, Ramakrishnan C, Deisseroth K, Shenoy KV (2011) An optogenetic toolbox designed for primates. Nat Neurosci 14:387-97 PMC3150193 pubmed |
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Shenoy KV, Kaufman MT, Sahani M, Churchland MM (2011) A dynamical systems view of motor preparation: implications for neural prosthetic system design. Prog Brain Res 192:33-58 PMC3665515 pubmed |
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Chestek CA, Gilja V, Nuyujukian P, Foster JD, Fan JM, Kaufman MT, Churchland MM, Rivera-Alvidrez Z, Cunningham JP, Ryu SI, Shenoy KV (2011) Long-term stability of neural prosthetic control signals from silicon cortical arrays in rhesus macaque motor cortex. J Neural Eng 8:045005 PMC3644617 pubmed |
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Churchland MM, Cunningham JP, Kaufman MT, Foster JD, Nuyujukian P, Ryu SI, Shenoy KV (2012) Neural population dynamics during reaching. Nature : PMC3393826 pubmed |
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Gilja V, Nuyujukian P, Chestek CA, Cunningham JP, Yu BM, Fan JM, Churchland MM, Kaufman MT, Kao JC, Ryu SI, Shenoy KV (2012) A high-performance neural prosthesis enabled by control algorithm design. Nat Neurosci 15:1752-7 PMC3638087 pubmed |
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Cowley BR, Kaufman MT, Churchland MM, Ryu SI, Shenoy KV, Yu BM (2012) DataHigh: graphical user interface for visualizing and interacting with high-dimensional neural activity. Conf Proc IEEE Eng Med Biol Soc 2012:4607-10 PMC3745770 pubmed |
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Kaufman MT, Churchland MM, Shenoy KV (2013) The roles of monkey M1 neuron classes in movement preparation and execution. J Neurophysiol : PMC3742981 pubmed |
|
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Cowley BR, Kaufman MT, Butler ZS, Churchland MM, Ryu SI, Shenoy KV, Yu BM (2013) DataHigh: graphical user interface for visualizing and interacting with high-dimensional neural activity. J Neural Eng 10:066012 PMC3950756 pubmed |
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Kaufman MT, Churchland MM, Ryu SI, Shenoy KV (2014) Cortical activity in the null space: permitting preparation without movement. Nat Neurosci : PMC3955357 pubmed |
Margeta, Milica (2005 - 2009) |
Shen |
Colón-Ramos DA, Margeta MA, Shen K (2007) Glia promote local synaptogenesis through UNC-6 (netrin) signaling in C. elegans. Science 318:103-6 PMC2741089 pubmed |
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Margeta MA, Shen K, Grill B (2008) Building a synapse: lessons on synaptic specificity and presynaptic assembly from the nematode C. elegans. Curr Opin Neurobiol 18:69-76 NIHMSID 464193pubmed |
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Margeta MA, Wang GJ, Shen K (2009) Clathrin adaptor AP-1 complex excludes multiple postsynaptic receptors from axons in C. elegans. Proc Natl Acad Sci U S A 106:1632-7 PMC2635768 pubmed |
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Margeta MA, Shen K (2010) Molecular mechanisms of synaptic specificity. Mol Cell Neurosci 43:261-7 PMC3168553 pubmed |
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Hoshino S, Sakamoto K, Vassilopoulos S, Camus SM, Griffin CA, Esk C, Torres JA, Ohkoshi N, Ishii A, Tamaoka A, Funke BH, Kucherlapati R, Margeta M, Rando TA, Brodsky FM (2013) The CHC22 clathrin-GLUT4 transport pathway contributes to skeletal muscle regeneration. PLoS One 8:e77787 PMC3813726 pubmed |
Teichmann, Hannah Margareta (2005 - 2010) |
Shen |
Teichmann HM, Shen K (2011) UNC-6 and UNC-40 promote dendritic growth through PAR-4 in Caenorhabditis elegans neurons. Nat Neurosci 14:165-72 NIHMSID 464197 pubmed |
Chia, Poh Hui (2007 - 2013) |
Shen |
Chia PH, Patel MR, Shen K (2012) NAB-1 instructs synapse assembly by linking adhesion molecules and F-actin to active zone proteins. Nat Neurosci 15:234-42 NIHMSID 336323 pubmed |
|
|
Chia PH, Patel MR, Wagner OI, Klopfenstein DR, Shen K (2013) Intramolecular regulation of presynaptic scaffold protein SYD-2/liprin-α Mol Cell Neurosci 56C:76-84 PMC3930023 pubmed |
|
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Chia PH, Li P, Shen K (2013) Cell biology in neuroscience: cellular and molecular mechanisms underlying presynapse formation. J Cell Biol 203:11-22 PMC3798257 pubmed |
|
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Ozkan E, Chia PH, Wang RR, Goriatcheva N, Borek D, Otwinowski Z, Walz T, Shen K, Garcia KC (2014) Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis. Cell 156:482-94 PMC3962013 pubmed |
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Chia PH, Chen B, Li P, Rosen MK, Shen K (2014) Local F-actin Network Links Synapse Formation and Axon Branching. Cell 156:208-20 PMC3954643 pubmed |
Ames, Katherine Cora (2009 - 2014) |
Shenoy |
Ames KC, Ryu SI, Shenoy KV (2014) Neural Dynamics of Reaching following Incorrect or Absent Motor Preparation. Neuron 81:438-51 PMC3936035 pubmed |
|
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|
Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Kalmar, Rachel Stern (2004 - 2010) |
Shenoy and Newsome |
Shenoy KV, Santhanam G, Ryu SI, Afshar A, Yu BM, Gilja V, Linderman MD, Kalmar RS, Cunningham JP, Kemere CT, Batista AP, Churchland MM, Meng TH (2006) Increasing the performance of cortically-controlled prostheses. Conf Proc IEEE Eng Med Biol Soc Suppl:6652-6 N/A Conference Paper pubmed |
|
|
Rivera-Alvidrez Z, Kalmar RS, Ryu SI, Shenoy KV (2010) Low-dimensional neural features predict muscle EMG signals. Conf Proc IEEE Eng Med Biol Soc 2010:6027-33 pubmed |
Kaufman, Matthew Tyler (2005 - 2011) |
Shenoy |
Knutson B, Taylor J, Kaufman M, Peterson R, Glover G (2005) Distributed neural representation of expected value. J Neurosci 25:4806-12 PMID:15888656 pubmed |
|
|
Kaufman MT, Churchland MM, Santhanam G, Yu BM, Afshar A, Ryu SI, Shenoy KV (2010) Roles of monkey premotor neuron classes in movement preparation and execution. J Neurophysiol 104:799-810 PMC2934936 pubmed |
|
|
Churchland MM, Cunningham JP, Kaufman MT, Ryu SI, Shenoy KV (2010) Cortical preparatory activity: representation of movement or first cog in a dynamical machine? Neuron 68:387-400 PMC2991102 pubmed |
|
|
Diester I, Kaufman MT, Mogri M, Pashaie R, Goo W, Yizhar O, Ramakrishnan C, Deisseroth K, Shenoy KV (2011) An optogenetic toolbox designed for primates. Nat Neurosci 14:387-97 PMC3150193 pubmed |
|
|
Shenoy KV, Kaufman MT, Sahani M, Churchland MM (2011) A dynamical systems view of motor preparation: implications for neural prosthetic system design. Prog Brain Res 192:33-58 PMC3665515 pubmed |
|
|
Chestek CA, Gilja V, Nuyujukian P, Foster JD, Fan JM, Kaufman MT, Churchland MM, Rivera-Alvidrez Z, Cunningham JP, Ryu SI, Shenoy KV (2011) Long-term stability of neural prosthetic control signals from silicon cortical arrays in rhesus macaque motor cortex. J Neural Eng 8:045005 PMC3644617 pubmed |
|
|
Churchland MM, Cunningham JP, Kaufman MT, Foster JD, Nuyujukian P, Ryu SI, Shenoy KV (2012) Neural population dynamics during reaching. Nature : PMC3393826 pubmed |
|
|
Gilja V, Nuyujukian P, Chestek CA, Cunningham JP, Yu BM, Fan JM, Churchland MM, Kaufman MT, Kao JC, Ryu SI, Shenoy KV (2012) A high-performance neural prosthesis enabled by control algorithm design. Nat Neurosci 15:1752-7 PMC3638087 pubmed |
|
|
Cowley BR, Kaufman MT, Churchland MM, Ryu SI, Shenoy KV, Yu BM (2012) DataHigh: graphical user interface for visualizing and interacting with high-dimensional neural activity. Conf Proc IEEE Eng Med Biol Soc 2012:4607-10 PMC3745770 pubmed |
|
|
Kaufman MT, Churchland MM, Shenoy KV (2013) The roles of monkey M1 neuron classes in movement preparation and execution. J Neurophysiol : PMC3742981 pubmed |
|
|
Cowley BR, Kaufman MT, Butler ZS, Churchland MM, Ryu SI, Shenoy KV, Yu BM (2013) DataHigh: graphical user interface for visualizing and interacting with high-dimensional neural activity. J Neural Eng 10:066012 PMC3950756 pubmed |
|
|
Kaufman MT, Churchland MM, Ryu SI, Shenoy KV (2014) Cortical activity in the null space: permitting preparation without movement. Nat Neurosci : PMC3955357 pubmed |
Ames, Katherine Cora (2009 - 2014) |
Shenoy |
Ames KC, Ryu SI, Shenoy KV (2014) Neural Dynamics of Reaching following Incorrect or Absent Motor Preparation. Neuron 81:438-51 PMC3936035 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Hua, Jackie (2000 - 2005) |
Smith |
Goldberg JL, Klassen MP, Hua Y, Barres BA (2002) Amacrine-signaled loss of intrinsic axon growth ability by retinal ganglion cells. Science 296:1860-4 PMID:12052959 pubmed |
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Hua JY, Smith SJ (2004) Neural activity and the dynamics of central nervous system development. Nat Neurosci 7:327-32 PMID:15048120 pubmed |
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Hua JY, Smear MC, Baier H, Smith SJ (2005) Regulation of axon growth in vivo by activity-based competition. Nature 434:1022-6 PMID:15846347 pubmed |
Weiler, Nicholas Collins (2007 - 2013) |
Smith |
Micheva KD, Busse B, Weiler NC, O'Rourke N, Smith SJ (2010) Single-synapse analysis of a diverse synapse population: proteomic imaging methods and markers. Neuron 68:639-53 PMC2995697pubmed |
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O'Rourke NA, Weiler NC, Micheva KD, Smith SJ (2012) Deep molecular diversity of mammalian synapses: why it matters and how to measure it. Nat Rev Neurosci 13:365-79 PMC3670986 pubmed |
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Burns R, Roncal WG, Kleissas D, Lillaney K, Manavalan P, Perlman E, Berger DR, Bock DD, Chung K, Grosenick L, Kasthuri N, Weiler NC, Deisseroth K, Kazhdan M, Lichtman J, Reid RC, Smith SJ, Szalay AS, Vogelstein JT, Vogelstein RJ (2013) The Open Connectome Project Data Cluster: Scalable Analysis and Vision for High-Throughput Neuroscience. Sci Stat Database Manag : PMC3881956 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Hoehn, Benjamin Douglass (2001 - 2005) |
Steinberg |
Hoehn B, Ringer TM, Xu L, Giffard RG, Sapolsky RM, Steinberg GK, Yenari MA (2001) Overexpression of HSP72 after induction of experimental stroke protects neurons from ischemic damage. J Cereb Blood Flow Metab 21:1303-9 PMID:11702045 pubmed |
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Hoehn BD, Harik SI, Hudetz AG (2002) VEGF mRNA expressed in microvessels of neonatal and adult rat cerebral cortex. Brain Res Mol Brain Res 101:103-8 PMID:12007837 pubmed |
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Hoehn B, Yenari MA, Sapolsky RM, Steinberg GK (2003) Glutathione peroxidase overexpression inhibits cytochrome C release and proapoptotic mediators to protect neurons from experimental stroke. Stroke 34:2489-94 PMID:14500933 pubmed |
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Hoehn BD, Palmer TD, Steinberg GK (2005) Neurogenesis in rats after focal cerebral ischemia is enhanced by indomethacin. Stroke 36:2718-24 PMID:16282546 pubmed |
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Kim MS, Lee J, Oh T, Moon Y, Chang E, Seo KS, Hoehn BD, An S, Lee JH (2012) Genome-wide identification of OTP gene as a novel methylation marker of breast cancer. Oncol Rep 27:1681-8pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Grant, Jacqueline Leigh (2008 - 2012) |
Steinman |
Grant JL, Ghosn EE, Axtell RC, Herges K, Kuipers HF, Woodling NS, Andreasson K, Herzenberg LA, Herzenberg LA, Steinman L (2012) Reversal of paralysis and reduced inflammation from peripheral administration of β-amyloid in TH1 and TH17 versions of experimental autoimmune encephalomyelitis. Sci Transl Med 4:145ra105 PMC3677069 pubmed |
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Steinman L, Axtell RC, Barbieri D, Bhat R, Brownell SE, de Jong BA, Dunn SE, Grant JL, Han MH, Ho PP, Kuipers HF, Kurnellas MP, Ousman SS, Rothbard JB (2013) Piet Mondrian's trees and the evolution in understanding multiple sclerosis, Charcot Prize Lecture 2011. Mult Scler 19:5-14 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Race, Elizabeth (2003 - 2009) |
Wagner |
Thomason ME, Race E, Burrows B, Whitfield-Gabrieli S, Glover GH, Gabrieli JD (2009) Development of spatial and verbal working memory capacity in the human brain. J Cogn Neurosci 21:316-32 PMC2746557 pubmed |
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Race EA, Shanker S, Wagner AD (2009) Neural priming in human frontal cortex: multiple forms of learning reduce demands on the prefrontal executive system. J Cogn Neurosci 21:1766-81 PMC2788302 pubmed |
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Race EA, Badre D, Wagner AD (2010) Multiple forms of learning yield temporally distinct electrophysiological repetition effects. Cereb Cortex 20:1726-38 PMC2912654 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Rauschecker, Andreas (2007 - 2011) |
Wandell |
Rauschecker AM, Solomon SG, Glennerster A (2006) Stereo and motion parallax cues in human 3D vision: can they vanish without a trace? J Vis 6:1471-85 PMID:17209749 pubmed |
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Rauschecker AM, Deutsch GK, Ben-Shachar M, Schwartzman A, Perry LM, Dougherty RF (2009) Reading impairment in a patient with missing arcuate fasciculus. Neuropsychologia 47:180-94 PMC2671152 pubmed |
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Dastjerdi M, Foster BL, Nasrullah S, Rauschecker AM, Dougherty RF, Townsend JD, Chang C, Greicius MD, Menon V, Kennedy DP, Parvizi J (2011) Differential electrophysiological response during rest, self-referential, and non-self-referential tasks in human posteromedial cortex. Proc Natl Acad Sci U S A 108:3023-8 PMC3041085 pubmed |
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Rauschecker AM, Dastjerdi M, Weiner KS, Witthoft N, Chen J, Selimbeyoglu A, Parvizi J (2011) Illusions of visual motion elicited by electrical stimulation of human MT complex. PLoS One 6:e21798 PMC3135604 pubmed |
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Rauschecker AM, Bowen RF, Perry LM, Kevan AM, Dougherty RF, Wandell BA (2011) Visual feature-tolerance in the reading network. Neuron 71:941-53 PMC3180962 pubmed |
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Nune G, Winawer J, Rauschecker AM, Dastjerdi M, Foster BL, Wandell B, Parvizi J (2011) Problem of signal contamination in interhemispheric dual-sided subdural electrodes. Epilepsia 52:e176-80 PMC3644859 pubmed |
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Wandell BA, Rauschecker AM, Yeatman JD (2012) Learning to see words. Annu Rev Psychol 63:31-53 PMC3228885 pubmed |
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Rauschecker AM, Bowen RF, Parvizi J, Wandell BA (2012) Position sensitivity in the visual word form area. Proc Natl Acad Sci U S A 109:E1568-77 PMC3386120 pubmed |
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Yeatman JD, Rauschecker AM, Wandell BA (2013) Anatomy of the visual word form area: adjacent cortical circuits and long-range white matter connections. Brain Lang 125:146-55 PMC3432298pubmed |
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Chen J, Dastjerdi M, Foster BL, Larocque KF, Rauschecker AM, Parvizi J, Wagner AD (2013) Human hippocampal increases in low-frequency power during associative prediction violations. Neuropsychologia : PMC3805697 pubmed |
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Winawer J, Kay KN, Foster BL, Rauschecker AM, Parvizi J, Wandell BA (2013) Asynchronous Broadband Signals Are the Principal Source of the BOLD Response in Human Visual Cortex. Curr Biol 23:1145-53 PMC3710543 pubmed |
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Student (Years in Program) |
Mentor(s) |
Publication (Authors, Year, Title, Journal, PMCID) |
Villeda, Saul Abraham (2004 - 2010) |
Wyss-Coray |
Villeda S, Wyss-Coray T (2008) Microglia--a wrench in the running wheel? Neuron 59:527-9 N/A: Commentary in a non-peer reviewed journal pubmed |
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Renault VM, Rafalski VA, Morgan AA, Salih DA, Brett JO, Webb AE, Villeda SA, Thekkat PU, Guillerey C, Denko NC, Palmer TD, Butte AJ, Brunet A (2009) FoxO3 regulates neural stem cell homeostasis. Cell Stem Cell 5:527-39 PMC2775802 pubmed |
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Villeda SA, Luo J, Mosher KI, Zou B, Britschgi M, Bieri G, Stan TM, Fainberg N, Ding Z, Eggel A, Lucin KM, Czirr E, Park JS, Couillard-Després S, Aigner L, Li G, Peskind ER, Kaye JA, Quinn JF, Galasko DR, Xie XS, Rando TA, Wyss-Coray T (2011) The ageing systemic milieu negatively regulates neurogenesis and cognitive function. Nature 477:90-4 PMC3170097 pubmed |
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Villeda SA, Wyss-Coray T (2012) The circulatory systemic environment as a modulator of neurogenesis and brain aging. Autoimmun Rev : N/A: Conference Proceeding, non-peer-reviewed pubmed |
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Luo J, Nguyen A, Villeda S, Zhang H, Ding Z, Lindsey D, Bieri G, Castellano JM, Beaupre GS, Wyss-Coray T (2014) Long-term cognitive impairments and pathological alterations in a mouse model of repetitive mild traumatic brain injury. Front Neurol 5:12 PMC3912443 pubmed |
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Villeda SA, Plambeck KE, Middeldorp J, Castellano JM, Mosher KI, Luo J, Smith LK, Bieri G, Lin K, Berdnik D, Wabl R, Udeochu J, Wheatley EG, Zou B, Simmons DA, Xie XS, Longo FM, Wyss-Coray T (2014) Young blood reverses age-related impairments in cognitive function and synaptic plasticity in mice. Nat Med : PMC4224436 pubmed |
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He Y, Zhang H, Yung A, Villeda SA, Jaeger PA, Olayiwola O, Fainberg N, Wyss-Coray T (2014) ALK5-dependent TGF-β signaling is a major determinant of late-stage adult neurogenesis. Nat Neurosci 17:943-52 PMC4096284 pubmed |
Mosher, Kira Lin (néeIrving) (2007 - 2013) |
Wyss-Coray |
Villeda SA, Luo J, Mosher KI, Zou B, Britschgi M, Bieri G, Stan TM, Fainberg N, Ding Z, Eggel A, Lucin KM, Czirr E, Park JS, Couillard-Després S, Aigner L, Li G, Peskind ER, Kaye JA, Quinn JF, Galasko DR, Xie XS, Rando TA, Wyss-Coray T (2011) The ageing systemic milieu negatively regulates neurogenesis and cognitive function. Nature 477:90-4 PMC3170097 pubmed |
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Mosher KI, Andres RH, Fukuhara T, Bieri G, Hasegawa-Moriyama M, He Y, Guzman R, Wyss-Coray T (2012) Neural progenitor cells regulate microglia functions and activity. Nat Neurosci 15:1485-7 PMC3495979 pubmed |
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Lucin KM, O'Brien CE, Bieri G, Czirr E, Mosher KI, Abbey RJ, Mastroeni DF, Rogers J, Spencer B, Masliah E, Wyss-Coray T (2013) Microglial beclin 1 regulates retromer trafficking and phagocytosis and is impaired in Alzheimer's disease. Neuron 79:873-86 PMC3779465 pubmed |