Sequence
S288C Reference Genome
Nucleic acid and protein sequences of Saccharomyces cerevisiae strain S288C.
| Name | Description | README | |
|---|---|---|---|
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Reference Genome/ | Access GenBank and RefSeq files for the 16 nuclear chromosomes and mitochondria of the S288C Reference Genome. | |
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chromosomes/ | FASTA sequence files of the 16 nuclear chromosomes and mitochondrial genome. |  |
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genome_releases/ | Files for each S288C reference genome release, including sequence and annotation. | |
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intergenic/ | Intergenic DNA sequences that are not contained within any annotated feature. | |
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NCBI_genome_source/ | Sequence files used by NCBI to create the S. cerevisiae reference genome sequence. | |
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orf_dna/ | ORF genomic and coding DNA sequences in FASTA format. | |
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orf_protein/ | Protein translations of ORFs and pseudogenes in FASTA format. | |
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other_features/ | Sequences of features other than ORFs in FASTA format. | |
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primer_sequences/ | Primers used to amplify ORFs and intergenic regions of S288C. | |
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rna/ | RNA gene sequences in FASTA format. | |
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SGD_features.tab | Chromosomal features and coordinates in SGD. | |
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saccharomyces_cerevisiae.gff | Genomic sequence features, coordinates and annotations. Used to load GBrowse. | |
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dates_of_genome_releases.tab | Dates of various genome releases. | |
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all_chromosome_sequence_changes | Tab-delimited file listing all changes made to chromosome reference sequences. | |
Strains
Nucleic acid and protein sequences of S. cerevisiae strains other than S288C.
![[ICO]](https://swap.stanford.edu/was/20151211033644im_/http://downloads.yeastgenome.org/icons/blank.gif){kind=icon} |
Name | Description | README |
|---|---|---|---|
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AWRI1631/ | Haploid derivative of South African commercial wine strain N96. | |
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AWRI796/ | South African red wine strain. | |
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BC187/ | Haploid derivative of California red wine isolate. | |
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BY4741/ | S288C-derivative laboratory strain. | |
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BY4742/ | S288C-derivative laboratory strain. | |
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CBS7960/ | Brazilian bioethanol factory isolate. | |
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CEN.PK/ | Laboratory strain. | |
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CLIB215/ | New Zealand bakery isolate. | |
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CLIB324/ | Vietnamese bakery isolate. | |
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CLIB382/ | Irish beer isolate. | |
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D273-10B/ | Laboratory strain. | |
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DBVPG6044/ | Haploid derivative of West African bili wine isolate. | |
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EC1118/ | Commercial wine strain. | |
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EC9-8/ | Haploid derivative of Israeli canyon isolate. | |
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FL100/ | Laboratory strain. | |
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Foster's B/ | Commercial ale strain. | |
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Foster's O/ | Commercial ale strain. | |
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FY1679/ | S288C-derivative laboratory strain. | |
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JAY291/ | Haploid derivative of Brazilian industrial bioethanol strain PE-2. | |
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JK9-3d/ | Laboratory strain. | |
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K11/ | Japanese sake yeast. | |
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Kyokai7/ | Japanese sake yeast. | |
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L1528/ | Chilean red wine isolate. | |
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LalvinQA23/ | Portuguese Vinho Verde white wine strain. | |
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M22/ | Italian vineyard isolate. | |
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PW5/ | Nigerian Raphia palm wine isolate. | |
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Red Star/ | Commercial baking yeast. | |
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RM11-1a/ | Haploid derivative of California Zinfandel vineyard isolate. | |
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SEY6210/ | Laboratory strain. | |
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Sigma1278b/ | Laboratory strain. | |
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SK1/ | Laboratory strain. | |
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T7/ | Missouri oak tree exudate isolate. | |
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T73/ | Spanish red wine strain. | |
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UC5/ | Japanese sake yeast. | |
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UWOPS05_217_3/ | Malaysian Bertram palm nectar isolate. | |
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VIN13/ | South African white wine strain. | |
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VL3/ | French white wine strain. | |
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W303/ | Laboratory strain. | |
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X2180-1A/ | S288C-derivative laboratory strain. | |
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Y10/ | Philippine coconut isolate. | |
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Y55/ | Laboratory strain. | |
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YJM269/ | Austrian Blauer Portugieser wine grape isolate. | |
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YJM339/ | Clinical isolate. | |
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YJM789/ | Haploid derivative of opportunistic human pathogen. | |
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YPH499/ | S288C-congenic laboratory strain. | |
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YPS128/ | Pennsylvania woodland isolate. | |
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YPS163/ | Pennsylvania woodland isolate. | |
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YS9/ | Singaporean commercial baking strain. | |
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ZTW1/ | Chinese corn mash bioethanol isolate. | |
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archive/ | Archived sequences of S. cerevisiae strains other than S288C. | |
Fungal Sequence
Nucleic acid and protein sequences of yeast and fungal species other than Saccharomyces cerevisiae.
| Name | Description | README | |
|---|---|---|---|
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L_kluyveri/ | Lachancea kluyveri (synonym Saccharomyces kluyveri). | |
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S_bayanus/ | Saccharomyces bayanus. | |
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S_uvarum/ | Saccharomyces bayanus var. uvarum. | |
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S_castellii/ | Saccharomyces castellii. | |
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S_kudriavzevii/ | Saccharomyces kudriavzevii. | |
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S_mikatae/ | Saccharomyces mikatae. | |
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S_paradoxus/ | Saccharomyces paradoxus. | |
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S_pastorianus/ | Saccharomyces pastorianus. | |
Yeast Viruses
FASTA sequence files for Saccharomyces cerevisiae viruses.
| Name | Description | README | |
|---|---|---|---|
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20S_RNA_Narnavirus_1997_NC004051.fsa | S. cerevisiae 20S RNA Narnavirus | |
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23S_RNA_Narnavirus_1997_NC004050.fsa | S. cerevisiae 23S RNA Narnavirus | |
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KillerVirusM1_1996_NC001782.fsa | S. cerevisiae killer virus M1 | |
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L-A_L1_2002_NC003745.fsa | S. cerevisiae virus L-A (L1) | |
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L-BC_La_1993_NC001641.fsa | S. cerevisiae virus L-BC (La) | |